RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ZNF18P17022 549 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 PFKLP17858 780 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 TARSP26639 723 aaKnown RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 USP8P40818 1118 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 KLK7P49862 253 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 PDE6CP51160 858 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 TKTL1P51854 596 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 SLC8A3P57103 927 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 PLCB2Q00722 1185 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 CNGA2Q16280 664 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 CC2D1AQ6P1N0 951 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 TXNDC11Q6PKC3 985 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 ENOSF1Q7L5Y1 443 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 SHC3Q92529 594 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 SECISBP2LQ93073 1101 aaKnown RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 UBXN6Q9BZV1 441 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 LINC00597Q9H2U6 94 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 LTB4R2Q9NPC1 389 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 SIT1Q9Y3P8 196 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 PIK3R2O00459 728 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 MDM4O15151 490 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 GABBR2O75899 941 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 LETM1O95202 739 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 PLA2G4AP47712 749 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 RGS7P49802 495 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 KPNA1P52294 538 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 CCDC186Q7Z3E2 898 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 CCDC105Q8IYK2 499 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 WBP2Q969T9 261 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 LSM14BQ9BX40 385 aaKnown RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 NDRG2Q9UN36 371 aaKnown RBP17.61■□□□□ 0.41
CBWD3-211ENST00000615061 FHOD1Q9Y613 1164 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 FAM170BA6NMN3 283 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 RARGP13631 454 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 ATP1A3P13637 1013 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 TCF3P15923 654 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 GNA15P30679 374 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 TUBP50607 506 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 COPB1P53618 953 aaKnown RBP17.6■□□□□ 0.41
CBWD3-211ENST00000615061 ADIGQ0VDE8 80 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 ZNF852Q6ZMS4 543 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 DHX40Q8IX18 779 aaKnown RBP17.6■□□□□ 0.41
CBWD3-211ENST00000615061 SLC35F5Q8WV83 523 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 OSCP1Q8WVF1 389 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 CHFRQ96EP1 664 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 ULBP1Q9BZM6 244 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
CBWD3-211ENST00000615061 DUS2Q9NX74 493 aaKnown RBP17.6■□□□□ 0.41
CBWD3-211ENST00000615061 CFAP97Q9P2B7 532 aa17.6■□□□□ 0.41
CBWD3-211ENST00000615061 SPECC1L-ADORA2AF8WAN1 911 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 FOXN3O00409 490 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-211ENST00000615061 SETSIPP0DME0 302 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 CTHP32929 405 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 RUNX3Q13761 415 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 EML3Q32P44 896 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 ITPRIPL2Q3MIP1 535 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 KLHDC7AQ5VTJ3 777 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 BHLHA9Q7RTU4 235 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 PRSS33Q8NF86 280 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 ZNF606Q8WXB4 792 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 FAM3CQ92520 227 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 FAM81BQ96LP2 452 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 NACA2Q9H009 215 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 DLGAP2Q9P1A6 1054 aa17.59■□□□□ 0.41
CBWD3-211ENST00000615061 LIMA1Q9UHB6 759 aaKnown RBP17.59■□□□□ 0.41
CBWD3-211ENST00000615061 THAP12O43422 761 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 ZBED1O96006 694 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 IRF1P10914 325 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 LCP1P13796 627 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.41
CBWD3-211ENST00000615061 FZD5Q13467 585 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 RAPGEF1Q13905 1077 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 STILQ15468 1287 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 NAIF1Q69YI7 327 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-211ENST00000615061 DENND1BQ6P3S1 775 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 APTXQ7Z2E3 356 aaKnown RBP17.58■□□□□ 0.41
CBWD3-211ENST00000615061 ZNF687Q8N1G0 1237 aa17.58■□□□□ 0.41
CBWD3-211ENST00000615061 NAT10Q9H0A0 1025 aaKnown RBP17.58■□□□□ 0.41
CBWD3-211ENST00000615061 GPD2P43304 727 aa17.58■□□□□ 0.4
CBWD3-211ENST00000615061 IFNAR2P48551 515 aa17.58■□□□□ 0.4
CBWD3-211ENST00000615061 ZNF165P49910 485 aa17.58■□□□□ 0.4
CBWD3-211ENST00000615061 PDGFRLQ15198 375 aa17.58■□□□□ 0.4
CBWD3-211ENST00000615061 PM20D1Q6GTS8 502 aa17.58■□□□□ 0.4
CBWD3-211ENST00000615061 KCTD13Q8WZ19 329 aa17.58■□□□□ 0.4
CBWD3-211ENST00000615061 NAA15Q9BXJ9 866 aaKnown RBP17.58■□□□□ 0.4
CBWD3-211ENST00000615061 MAN2B1O00754 1011 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 UCHL3P15374 230 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 CLCN1P35523 988 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 ATP5C1P36542 298 aaKnown RBP17.57■□□□□ 0.4
CBWD3-211ENST00000615061 DRAP1Q14919 205 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-211ENST00000615061 C10orf120Q5SQS8 335 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 SIX6OS1Q8N1H7 587 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 CLEC4CQ8WTT0 213 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 C8orf33Q9H7E9 229 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-211ENST00000615061 ECT2Q9H8V3 914 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms