RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SLC8A3P57103 927 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 EIF3EP60228 445 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 BASP1P80723 227 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 ZNF844Q08AG5 666 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 PPP2R5EQ16537 467 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 LONRF1Q17RB8 773 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 TRIM71Q2Q1W2 868 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 PPP1R2P3Q6NXS1 205 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 DARS2Q6PI48 645 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 ANKMY2Q8IV38 441 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 TP53INP2Q8IXH6 220 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 OR10T2Q8NGX3 314 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 FAM76AQ8TAV0 307 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SLC7A14Q8TBB6 771 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 EPS8L3Q8TE67 593 aaKnown RBP3.59□□□□□ -1.83
LIG4-205ENST00000614526 RSAD2Q8WXG1 361 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 LINC01599Q8WXQ3 324 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SMOQ99835 787 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 DUSP16Q9BY84 665 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 MED4Q9NPJ6 270 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 CHST12Q9NRB3 414 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 GIT1Q9Y2X7 761 aa3.59□□□□□ -1.83
LIG4-205ENST00000614526 SCN10AQ9Y5Y9 1956 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 TCRBV7S3A2A0A539 114 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 OPA1O60313 960 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 NBNO60934 754 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 CAND2O75155 1236 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 AMHP03971 560 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 MYZAPP0CAP1 466 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 IVDP26440 423 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 LRPAP1P30533 357 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 AARSP49588 968 aaKnown RBP eCLIP3.59□□□□□ -1.84
LIG4-205ENST00000614526 PGFP49763 221 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 YWHAZP63104 245 aaKnown RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 GUCY1A3Q02108 690 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 DPYSL3Q14195 570 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 FASTKD3Q14CZ7 662 aaKnown RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 STILQ15468 1287 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 CLLU1OSQ5K130 101 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD22Q5VYY1 191 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ALS2CLQ60I27 953 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 DENND2CQ68D51 928 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ARHGAP17Q68EM7 881 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 OVOS1Q6IE37 1185 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 GLB1LQ6UWU2 654 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 CYP4V2Q6ZWL3 525 aaPredicted RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 FAM35AQ86V20 835 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ABI1Q8IZP0 508 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 TTC39CQ8N584 583 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 TOP6BLQ8N6T0 577 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 CCDC89Q8N998 374 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 TTC16Q8NEE8 873 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ZMIZ2Q8NF64 920 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 MDM1Q8TC05 714 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 MAIP1Q8WWC4 291 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 P3H4Q92791 437 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ART4Q93070 314 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 MYLPFQ96A32 169 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 SNF8Q96H20 258 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 FAM193BQ96PV7 902 aaPredicted RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 RTP3Q9BQQ7 232 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.59□□□□□ -1.844e-6■■■■■ 37.9
LIG4-205ENST00000614526 CDC42EP4Q9H3Q1 356 aaKnown RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 AAASQ9NRG9 546 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 ETNK2Q9NVF9 386 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 PIH1D1Q9NWS0 290 aaKnown RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 DDX56Q9NY93 547 aaKnown RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 ABI2Q9NYB9 513 aaPredicted RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.59□□□□□ -1.848e-7■■■■■ 73.7
LIG4-205ENST00000614526 CTNNAL1Q9UBT7 734 aa3.59□□□□□ -1.84
LIG4-205ENST00000614526 RANBP2P49792 3224 aaKnown RBP3.59□□□□□ -1.84
LIG4-205ENST00000614526 CDH23Q9H251 3354 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 H0YGN5 161 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ARVCFO00192 962 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 C2CD2LO14523 706 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GOT1P17174 413 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 WARSP23381 471 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 IL4RP24394 825 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CYP2C18P33260 490 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GRIK1P39086 918 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GPR15P49685 360 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 VCPP55072 806 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 MAGOHP61326 146 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 IFI35P80217 286 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 GBE1Q04446 702 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TUSC3Q13454 348 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 DSC3Q14574 896 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CLUL1Q15846 466 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 DDR2Q16832 855 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TCTN1Q2MV58 587 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLC39A12Q504Y0 691 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 LRRC38Q5VT99 294 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLC24A5Q71RS6 500 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 LRRC8DQ7L1W4 858 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 METTL23Q86XA0 190 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CCDC13Q8IYE1 715 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 NIPA2Q8N8Q9 360 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 C12orf50Q8NA57 414 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 TET1Q8NFU7 2136 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CMASQ8NFW8 434 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms