RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 UGT1A7Q9HAW7 530 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 UGT1A10Q9HAW8 530 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 UGT1A8Q9HAW9 530 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 USP29Q9HBJ7 922 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 PCDH18Q9HCL0 1135 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 VTA1Q9NP79 307 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 ARL2BPQ9Y2Y0 163 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 C2CD2Q9Y426 696 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 NUMBLQ9Y6R0 609 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 LOC102724159A0A0B4J2E5 919 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 A8MXQ7 604 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 IGF2BP3O00425 579 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 DNAJC8O75937 253 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 GRIA1P42261 906 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 PITX1P78337 314 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 PWP2Q15269 919 aaKnown RBP14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 PPP1R21Q6ZMI0 780 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 TTC13Q8NBP0 860 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 TCP10LQ8TDR4 215 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 DCAKDQ8WVC6 231 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 DNAJB3Q8WWF6 145 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 TBC1D31Q96DN5 1066 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 CEP41Q9BYV8 373 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 ADAMTS10Q9H324 1103 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 BAIAP2L1Q9UHR4 511 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 STK38LQ9Y2H1 464 aa14.68□□□□□ -0.06
PCDHGA3-202ENST00000612467 ZSWIM8A7E2V4 1837 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 TCRBV9S1A1TA0A576 114 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 ENDOD1O94919 500 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 GRM5P41594 1212 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SOX4Q06945 474 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SLC10A2Q12908 348 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 ACVR2BQ13705 512 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 PDIK1LQ8N165 341 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SHCBP1Q8NEM2 672 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 PTPRN2Q92932 1015 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SERAC1Q96JX3 654 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 PGLYRP2Q96PD5 576 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 ETNK2Q9NVF9 386 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 ZNF638Q14966 1978 aaKnown RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 CXorf49A8MYA2 514 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 PCK1P35558 622 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 GSCP56915 257 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 FAAP100Q0VG06 881 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SPARCL1Q14515 664 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 PKDCCQ504Y2 493 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 HHATQ5VTY9 493 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 DPY19L2Q6NUT2 758 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 USP50Q70EL3 339 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 CTU1Q7Z7A3 348 aaKnown RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 CEP57Q86XR8 500 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 TDRPQ86YL5 185 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 CCDC185Q8N715 623 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 MZB1Q8WU39 189 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 SNX27Q96L92 541 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 TMEM237Q96Q45 408 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 PTPN18Q99952 460 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 DHX35Q9H5Z1 703 aaKnown RBP14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 EFR3BQ9Y2G0 817 aa14.67□□□□□ -0.06
PCDHGA3-202ENST00000612467 GPR32O75388 356 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 APRTP07741 180 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 KRT16P08779 473 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 ACAT1P24752 427 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 SDC4P31431 198 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 MSH2P43246 934 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 BCAR1P56945 870 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 BEX3Q00994 111 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 SLC6A3Q01959 620 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 RNASELQ05823 741 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 GALNTL6Q49A17 601 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 SUGP1Q8IWZ8 645 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 MPP5Q8N3R9 675 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 RIBC1Q8N443 379 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 MYLK2Q9H1R3 596 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 ACSS3Q9H6R3 686 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 SPON1Q9HCB6 807 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 SLC5A4Q9NY91 659 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 ACTL7BQ9Y614 415 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 E7ESA3 106 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 CLDN5O00501 218 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 METTL18O95568 372 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 GTF2A1P52655 376 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 CCNA1P78396 465 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 POU5F1BQ06416 359 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 KCNJ11Q14654 390 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 DUSP28Q4G0W2 176 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 PCGF5Q86SE9 256 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 TINF2Q9BSI4 451 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 TRIM6Q9C030 488 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 PLAC1Q9HBJ0 212 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 SLC17A6Q9P2U8 582 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 DCTN4Q9UJW0 460 aa14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 PIN4Q9Y237 131 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-202ENST00000612467 C2orf71A6NGG8 1288 aa14.65□□□□□ -0.06
PCDHGA3-202ENST00000612467 MEIS3P2A8K0S8 358 aa14.65□□□□□ -0.06
PCDHGA3-202ENST00000612467 PRPF4O43172 522 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHGA3-202ENST00000612467 SMIM10L2AP0DMW4 78 aa14.65□□□□□ -0.06
PCDHGA3-202ENST00000612467 SMIM10L2BP0DMW5 78 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms