RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SCG3Q8WXD2 468 aaKnown RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 APOL6Q9BWW8 343 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 KCNK13Q9HB14 408 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 PIDD1Q9HB75 910 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 I3L4J1 428 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 LYPLA1O75608 230 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 LSM8O95777 96 aaKnown RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 IQCF3P0C7M6 154 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ZCCHC18P0CG32 403 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 KCNA3P22001 575 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 BLMHQ13867 455 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 UBAP2LQ14157 1087 aaKnown RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 RNF220Q5VTB9 566 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 TRNP1Q6NT89 227 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 POLNQ7Z5Q5 900 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 DEFB132Q7Z7B7 95 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 TREML1Q86YW5 311 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 NRG4Q8WWG1 115 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 EBF4Q9BQW3 602 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 CYP4F11Q9HBI6 524 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 PACSIN3Q9UKS6 424 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 STRIP2Q9ULQ0 834 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 CNTN6Q9UQ52 1028 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ARHGAP42A6NI28 874 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 LACTBL1A8MY62 500 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 APOC4-APOC2K7ER74 178 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 GPR25O00155 361 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 SMIM24O75264 130 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 APOC2P02655 101 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 ABCG1P45844 678 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 PEX6Q13608 980 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 JADE1Q6IE81 842 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 RSPH3Q86UC2 560 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 NUDCD3Q8IVD9 361 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 HACE1Q8IYU2 909 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 TTC13Q8NBP0 860 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 OXNAD1Q96HP4 312 aaPredicted RBP14.62□□□□□ -0.07
COL6A1-207ENST00000612273 PPP1R36Q96LQ0 422 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 SMYD2Q9NRG4 433 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 SIX4Q9UIU6 781 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 TRUB2O95900 331 aaKnown RBP14.62□□□□□ -0.07
COL6A1-207ENST00000612273 LINGO3P0C6S8 592 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 GTF2A2P52657 109 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 MAP1SQ66K74 1059 aaPredicted RBP14.62□□□□□ -0.07
COL6A1-207ENST00000612273 GADL1Q6ZQY3 521 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 SLC4A11Q8NBS3 891 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 MZB1Q8WU39 189 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 C20orf27Q9GZN8 174 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 CYLDQ9NQC7 956 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 BATF3Q9NR55 127 aa14.62□□□□□ -0.07
COL6A1-207ENST00000612273 CPSF3Q9UKF6 684 aaKnown RBP14.62□□□□□ -0.07
COL6A1-207ENST00000612273 G3BP2Q9UN86 482 aaKnown RBP14.62□□□□□ -0.07
COL6A1-207ENST00000612273 DLDP09622 509 aaKnown RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 EPHB1P54762 984 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 CDK16Q00536 496 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 GHRHRQ02643 423 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 CES4AQ5XG92 561 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 EFCAB12Q6NXP0 572 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 SEPT1Q8WYJ6 367 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 APOPT1Q96IL0 206 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 VPS11Q9H270 941 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 DCLRE1BQ9H816 532 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 AS3MTQ9HBK9 375 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 SEPT10Q9P0V9 454 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 LOC100653049A0A140TA62 436 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 CCDC78A2IDD5 438 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 KRT34O76011 436 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 VTNP04004 478 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 CSH1P0DML2 217 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 CSH2P0DML3 217 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 KCNA4P22459 653 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 SESN2P58004 480 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 TMEM62Q0P6H9 643 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 PPP2R5DQ14738 602 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 XRRA1Q6P2D8 792 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 TEX9Q8N6V9 391 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 BTBD7Q9P203 1132 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 MFHAS1Q9Y4C4 1052 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 MRPL42Q9Y6G3 142 aaKnown RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 NDST1P52848 882 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 YWHAZP63104 245 aaKnown RBP14.61□□□□□ -0.07
COL6A1-207ENST00000612273 MAP3K10Q02779 954 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 FAM183BPQ6ZVS7 135 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 ACOT1Q86TX2 421 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 SLC44A1Q8WWI5 657 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 CDT1Q9H211 546 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 STOML1Q9UBI4 398 aa14.61□□□□□ -0.07
COL6A1-207ENST00000612273 TM9SF1O15321 606 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 FAM189A1O60320 539 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ZMPSTE24O75844 475 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 RPL10AP62906 217 aaKnown RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 GBE1Q04446 702 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 EML3Q32P44 896 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 CATSPERGQ6ZRH7 1159 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 RBM15BQ8NDT2 890 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms