RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 SOX10P56693 466 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAAP100Q0VG06 881 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 TBL3Q12788 808 aaKnown RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZNF235Q14590 738 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAM83EQ2M2I3 478 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 EFL1Q7Z2Z2 1120 aaKnown RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 TBC1D10AQ9BXI6 508 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 NEUROG2Q9H2A3 272 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 RAP1GAPP47736 663 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ATXN3P54252 364 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ORC1Q13415 861 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZNF555Q8NEP9 628 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZMYM2Q9UBW7 1377 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 LIN7AO14910 233 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 PSMC3P17980 439 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 HADHAP40939 763 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ASTE1Q2TB18 679 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 KYAT3Q6YP21 454 aaKnown RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 PHF13Q86YI8 300 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 GPATCH2LQ9NWQ4 482 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 CLPTM1O96005 669 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 MPOP05164 745 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAM83AQ86UY5 434 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ASPSCR1Q9BZE9 553 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 GRIN2DO15399 1336 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 CCDC78A2IDD5 438 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 CHADO15335 359 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 KCNA2P16389 499 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 CYP2F1P24903 491 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 PPATQ06203 517 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 N4BP2L1Q5TBK1 243 aaPredicted RBP11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 MFN1Q8IWA4 741 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 CYGBQ8WWM9 190 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZNF711Q9Y462 761 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 TAF6P49848 677 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 BCAT1P54687 386 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 BACE1P56817 501 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLFN11Q7Z7L1 901 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 TRABD2AQ86V40 505 aa11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.6
CDC42EP3-206ENST00000611976 KIF13AQ9H1H9 1805 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 MAP3K6O95382 1288 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ESRRBO95718 433 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 STAG3L1P0CL83 205 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 KDELR1P24390 212 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 PTDSS1P48651 473 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 MMP14P50281 582 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 SLC26A2P50443 739 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 PEX5P50542 639 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 PRKAA2P54646 552 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 NCKAP1LP55160 1127 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 TMTC4Q5T4D3 741 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 NET1Q7Z628 596 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 STRA8Q7Z7C7 330 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 IPMKQ8NFU5 416 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 CERKQ8TCT0 537 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 LRFN2Q9ULH4 789 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 F8VP50 259 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 C2CD2LO14523 706 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ATP4AP20648 1035 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 NR2C2P49116 596 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 CAPRIN1Q14444 709 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 AGAP9Q5VTM2 703 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 NOTUMQ6P988 496 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ZDHHC17Q8IUH5 632 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 KYQ8NBH2 561 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 TMEM161BQ8NDZ6 487 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 DEFB129Q9H1M3 183 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 CAAP1Q9H8G2 361 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 ACP6Q9NPH0 428 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 SLC38A7Q9NVC3 462 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
CDC42EP3-206ENST00000611976 PGAM1P18669 254 aa11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 XPAP23025 273 aaPredicted RBP11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 GP5P40197 560 aa11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 GRTP1Q5TC63 336 aa11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 TTC33Q6PID6 262 aaPredicted RBP11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 UNC45BQ8IWX7 931 aa11.26□□□□□ -0.61
CDC42EP3-206ENST00000611976 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms