RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SLC2A14Q8TDB8 520 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 HEXIM2Q96MH2 286 aaKnown RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 NECAB3Q96P71 396 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PNKPQ96T60 521 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ARFGAP3Q9NP61 516 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 DMAP1Q9NPF5 467 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 GDE1Q9NZC3 331 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 EPS15L1Q9UBC2 864 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SALL4Q9UJQ4 1053 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CDH7Q9ULB5 785 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 KIAA1257Q9ULG3 409 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 NENFQ9UMX5 172 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PCDHB4Q9Y5E5 795 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 A0A087X0T9 212 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SLC38A8A6NNN8 435 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SRGAP2O75044 1071 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 AP1G2O75843 785 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SEC31AO94979 1220 aaKnown RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 FAM228BP0C875 321 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 FAM200BP0CF97 657 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 VDRP11473 427 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 MYL4P12829 197 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 LAMP2P13473 410 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CCDC130P13994 396 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 HMGA1P17096 107 aaKnown RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 RFX1P22670 979 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SP100P23497 879 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PTK2Q05397 1052 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SLC5A9Q2M3M2 681 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SGO2Q562F6 1265 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 SDHAF4Q5VUM1 108 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 WDR93Q6P2C0 686 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 DENND5BQ6ZUT9 1274 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CREG2Q8IUH2 290 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ITFG1Q8TB96 612 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 GPR152Q8TDT2 470 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 FGF13Q92913 245 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 KAT5Q92993 513 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 NXPE3Q969Y0 559 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 TCEAL4Q96EI5 215 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 TRMT2BQ96GJ1 504 aaKnown RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 MYRFLQ96LU7 910 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 KREMEN1Q96MU8 473 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 NOX5Q96PH1 765 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 MYADMQ96S97 322 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 GPR88Q9GZN0 384 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CSNK1G1Q9HCP0 422 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 KRT82Q9NSB4 513 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ZMYM5Q9UJ78 669 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CNTN6Q9UQ52 1028 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ANAPC1Q9H1A4 1944 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 MOSPD3O75425 235 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 GABBR2O75899 941 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 GFPT2O94808 682 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 RTN3O95197 1032 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 NPR3P17342 541 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 TCP1P17987 556 aaKnown RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 GABRR2P28476 465 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ADORA2BP29275 332 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 CCR2P41597 374 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 PLA2G4AP47712 749 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF132P52740 706 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 STILQ15468 1287 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ARHGAP15Q53QZ3 475 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 GAREM2Q75VX8 874 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 NPAS3Q8IXF0 933 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 NUP93Q8N1F7 819 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 SHKBP1Q8TBC3 707 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 GCNAQ96QF7 691 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 SPAG5Q96R06 1193 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 SMOQ99835 787 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 TTLL2Q9BWV7 592 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 DUSP16Q9BY84 665 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 FUT8Q9BYC5 575 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 UBXN6Q9BZV1 441 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ATXN3LQ9H3M9 355 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 IL21Q9HBE4 155 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF334Q9HCZ1 680 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 PNPLA8Q9NP80 782 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 COMMD8Q9NX08 183 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 IGSF9Q9P2J2 1179 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 ADAMTS1Q9UHI8 967 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 AJAP1Q9UKB5 411 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 MAGED2Q9UNF1 606 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-217ENST00000611848 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
SMAD4-217ENST00000611848 OBSL1O75147 1896 aa9.29□□□□□ -0.92
SMAD4-217ENST00000611848 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
SMAD4-217ENST00000611848 TARSL2A2RTX5 802 aaKnown RBP9.29□□□□□ -0.92
SMAD4-217ENST00000611848 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
SMAD4-217ENST00000611848 PDE2AO00408 941 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-217ENST00000611848 MAP2K7O14733 419 aa9.29□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF185O15231 689 aa9.29□□□□□ -0.92
SMAD4-217ENST00000611848 SASH3O75995 380 aa9.29□□□□□ -0.92
SMAD4-217ENST00000611848 F11P03951 625 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms