RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 ZKSCAN1P17029 563 aaPredicted RBP4.3□□□□□ -1.72
TARDBP-212ENST00000611008 PEX2P28328 305 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 RENBPP51606 427 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 SP2Q02086 613 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 SRSF1Q07955 248 aaKnown RBP eCLIP4.3□□□□□ -1.728e-7■□□□□ 10.8
TARDBP-212ENST00000611008 TCF15Q12870 199 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
TARDBP-212ENST00000611008 ZNF549Q6P9A3 640 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 R3HDM4Q96D70 268 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 SIGLEC11Q96RL6 698 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 P2RX7Q99572 595 aaKnown RBP4.3□□□□□ -1.72
TARDBP-212ENST00000611008 SARGQ9BW04 601 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 TFCP2L1Q9NZI6 479 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 HEY2Q9UBP5 337 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 ZDHHC8Q9ULC8 765 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 OGDHLQ9ULD0 1010 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 SNX13Q9Y5W8 968 aa4.3□□□□□ -1.72
TARDBP-212ENST00000611008 USP19O94966 1318 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 A1L4Q6 167 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 C4orf47A7E2U8 309 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 M0QYG6 137 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 MYO1CO00159 1063 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 APAF1O14727 1248 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 TBC1D4O60343 1298 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 TULP3O75386 442 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 TJP3O95049 919 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 RARBP10826 455 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 TRIM27P14373 513 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 ALDH5A1P51649 535 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-212ENST00000611008 SUMO3P55854 103 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-212ENST00000611008 PICALMQ13492 652 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 GALEQ14376 348 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 FAM187BQ17R55 369 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 L1TD1Q5T7N2 865 aaKnown RBP4.29□□□□□ -1.72
TARDBP-212ENST00000611008 IL31Q6EBC2 164 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 SWSAP1Q6NVH7 229 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 APOA5Q6Q788 366 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 ZNF783Q6ZMS7 281 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 COLCA1Q6ZS62 124 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 PPP1R32Q7Z5V6 425 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 MPP5Q8N3R9 675 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-212ENST00000611008 PJA1Q8NG27 643 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 OR6B3Q8NGW1 331 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 GLG1Q92896 1179 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 THAP7Q9BT49 309 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-212ENST00000611008 CIPCQ9C0C6 399 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 LRRC27Q9C0I9 530 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 ZNF287Q9HBT7 754 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 SACM1LQ9NTJ5 587 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-212ENST00000611008 HS3ST3B1Q9Y662 390 aa4.29□□□□□ -1.72
TARDBP-212ENST00000611008 CCDC194A0A1B0GVG4 234 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 LACTBL1A8MY62 500 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 PMM2O15305 246 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 DLDP09622 509 aaKnown RBP4.28□□□□□ -1.72
TARDBP-212ENST00000611008 MYF5P13349 255 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 NPR1P16066 1061 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 NEK3P51956 506 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 HDAC1Q13547 482 aaPredicted RBP4.28□□□□□ -1.72
TARDBP-212ENST00000611008 KIF22Q14807 665 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 POLD3Q15054 466 aaPredicted RBP4.28□□□□□ -1.72
TARDBP-212ENST00000611008 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 GSG1LQ6UXU4 331 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 USP37Q86T82 979 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 SLC15A3Q8IY34 581 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 FAM46DQ8NEK8 389 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 IL31RAQ8NI17 732 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
TARDBP-212ENST00000611008 ADAMTS18Q8TE60 1221 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 PARD3BQ8TEW8 1205 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 ATG4AQ8WYN0 398 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 FYTTD1Q96QD9 318 aaKnown RBP4.28□□□□□ -1.72
TARDBP-212ENST00000611008 ZPBPQ9BS86 351 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 C22orf23Q9BZE7 217 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 NUP62CLQ9H1M0 184 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 ATP6V0A4Q9HBG4 840 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 TMEM184CQ9NVA4 438 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 CPNE7Q9UBL6 633 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 CORO2BQ9UQ03 480 aa4.28□□□□□ -1.72
TARDBP-212ENST00000611008 TCRBV5S1A1TA0A578 114 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 PRSS29PA6NIE9 313 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 RHPN2P1A8MT19 583 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 RNF8O76064 485 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 UNC5CO95185 931 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 HRGP04196 525 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 GRPP07492 148 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 IFIT2P09913 472 aaKnown RBP4.27□□□□□ -1.73
TARDBP-212ENST00000611008 ID2Q02363 134 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 SEMA5AQ13591 1074 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 BOP1Q14137 746 aaKnown RBP4.27□□□□□ -1.73
TARDBP-212ENST00000611008 BRD3Q15059 726 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 SYCP2LQ5T4T6 812 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 ANKRD13BQ86YJ7 626 aa4.27□□□□□ -1.73
TARDBP-212ENST00000611008 ARFGAP1Q8N6T3 406 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms