RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NAPEPLDQ6IQ20 393 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SMARCD1Q96GM5 515 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 EGFL8Q99944 293 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 XAB2Q9HCS7 855 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ZFP69BQ9UJL9 534 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 FRMD3A2A2Y4 597 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 H0Y626 953 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 H7C4K7 107 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ZSCAN5DPP0CG00 497 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 MBL2P11226 248 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 DARSP14868 501 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ADSSP30520 456 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 CDH18Q13634 790 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 MAP3K21Q5TCX8 1036 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 AGBL2Q5U5Z8 902 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ARHGAP18Q8N392 663 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GBP7Q8N8V2 638 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 NUF2Q9BZD4 464 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 VCXQ9H320 206 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 DMAP1Q9NPF5 467 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 AAASQ9NRG9 546 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TRPM5Q9NZQ8 1165 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 PCDHB5Q9Y5E4 795 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 H3BQF6 201 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SMAPO00193 183 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 EIF3HO15372 352 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GYG2O15488 501 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 KRT4P19013 534 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 FSTL1Q12841 308 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ELAVL2Q12926 359 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SNCBQ16143 134 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 KIF19Q2TAC6 998 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TMTC4Q5T4D3 741 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 DDX53Q86TM3 631 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 LRRC15Q8TF66 581 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 PPWD1Q96BP3 646 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 FAM105AQ9NUU6 356 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 FGFR1OP2Q9NVK5 253 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ARHGEF38Q9NXL2 777 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 WHRNQ9P202 907 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SLC39A10Q9ULF5 831 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 LTBP3Q9NS15 1303 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 NUP98P52948 1817 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 F5H5T6 163 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 H0Y3Z8 333 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 MYO1CO00159 1063 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 CLDN5O00501 218 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 STK25O00506 426 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 HAUS5O94927 633 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 LTFP02788 710 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TGM2P21980 687 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 CCR1P32246 355 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GRM5P41594 1212 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GEMIN4P57678 1058 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF177Q13360 481 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 CCL14Q16627 93 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 LVRNQ6Q4G3 990 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 B3GALNT2Q8NCR0 500 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 HELQQ8TDG4 1101 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 BLOC1S5Q8TDH9 187 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ALG3Q92685 438 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 RMDN2Q96LZ7 410 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TBCBQ99426 244 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TRPV6Q9H1D0 765 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 EPN3Q9H201 632 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ST6GALNAC4Q9H4F1 302 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ACTR5Q9H9F9 607 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ETNK1Q9HBU6 452 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 KCND1Q9NSA2 647 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TUBGCP4Q9UGJ1 667 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 RAB21Q9UL25 225 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SIGLEC16A6NMB1 481 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SPAG6O75602 509 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ASGR1P07306 291 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GFAPP14136 432 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SPRP35270 261 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ERFP50548 548 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 CLNS1AP54105 237 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 PPP1R26Q5T8A7 1209 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 FAM183BPQ6ZVS7 135 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 UNC93AQ86WB7 457 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 MRPS31Q92665 395 aaKnown RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 ULK4Q96C45 1275 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SGF29Q96ES7 293 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 DEFB118Q96PH6 123 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 TASP1Q9H6P5 420 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 IPPQ9Y573 584 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-218ENST00000610726 SLC30A1Q9Y6M5 507 aa7.54□□□□□ -1.2
CSDE1-218ENST00000610726 GOLGA8QA0A0J9YX86 632 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SMIM28A0A1B0GU29 152 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 GOLGA8OA6NCC3 632 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 NT5C1B-RDH14C9J2C7 533 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 GOLGA8NF8WBI6 632 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms