RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 NUF2Q9BZD4 464 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 UNKQ9C0B0 810 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ARHGAP28Q9P2N2 729 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 BCAP29Q9UHQ4 241 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 DRG1Q9Y295 367 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 TELO2Q9Y4R8 837 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 SIGLEC16A6NMB1 481 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 LACTBL1A8MY62 500 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 E9PBE3 544 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 KLHL41O60662 606 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 USP12O75317 370 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ASMTLO95671 621 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ITGAVP06756 1048 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 GNAT1P11488 350 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 NUMBP49757 651 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 CDK16Q00536 496 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 MED21Q13503 144 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 RIPK1Q13546 671 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ZC3H12AQ5D1E8 599 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 WASHC2DQ5SRD0 308 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 BBS12Q6ZW61 710 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 C12orf29Q8N999 325 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 COPS5Q92905 334 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 CPXM1Q96SM3 734 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 CENPKQ9BS16 269 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ST6GALNAC4Q9H4F1 302 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 DENND2DQ9H6A0 471 aaPredicted RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ACSS3Q9H6R3 686 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 VCX3AQ9NNX9 186 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 DPP3Q9NY33 737 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 LRCH4O75427 683 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 VNN1O95497 513 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CYP1A1P04798 512 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 RARBP10826 455 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 VDRP11473 427 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 AMPD1P23109 780 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CDKN2BP42772 138 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 TPD52P55327 224 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 KIZQ2M2Z5 673 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 FASTKD1Q53R41 847 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 EFHC2Q5JST6 749 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 TWF2Q6IBS0 349 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 JADE1Q6IE81 842 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ZPBP2Q6X784 338 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ARMCX2Q7L311 632 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 TTC7BQ86TV6 843 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 GALNT4Q8N4A0 578 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 DDX1Q92499 740 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 INPP5DQ92835 1189 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 HDAC11Q96DB2 347 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 TMA16Q96EY4 203 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SERPINI1Q99574 410 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ANLNQ9NQW6 1124 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 PRMT7Q9NVM4 692 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CHD4Q14839 1912 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 KPNA7A9QM74 516 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 KCNK1O00180 336 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SMAPO00193 183 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CYB561D2O14569 222 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 XPOTO43592 962 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 IL18RAPO95256 599 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SRGAP2BP0DMP2 458 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 KCNA2P16389 499 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ZFXP17010 805 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CYP2F1P24903 491 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 GLRBP48167 497 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SERPINB9P50453 376 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 COPAP53621 1224 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC34A1Q06495 639 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ITGA9Q13797 1035 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 NBPF20Q3BBV1 942 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 RNASEH2BQ5TBB1 312 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 N4BP2L1Q5TBK1 243 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 LRRC38Q5VT99 294 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ZNF772Q68DY9 489 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 LRRC74BQ6ZQY2 392 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 DEFB132Q7Z7B7 95 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 APOBEC3FQ8IUX4 373 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 RNF148Q8N7C7 305 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ICA1LQ8NDH6 482 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CHST13Q8NET6 341 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 USP6NLQ92738 828 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 NMUR2Q9GZQ4 415 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 UBP1Q9NZI7 540 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC39A10Q9ULF5 831 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 WDR27A2RRH5 827 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 GOLGA8TH3BQL2 631 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 C2CD2LO14523 706 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 HBP1O60381 514 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 ZMPSTE24O75844 475 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 PTPRAP18433 802 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SOX11P35716 441 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 SERPINB5P36952 375 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CASP2P42575 452 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 IREB2P48200 963 aaKnown RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 CACNA2D1P54289 1103 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 IRX1P78414 480 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 EML3Q32P44 896 aa7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 TCHHL1Q5QJ38 904 aaPredicted RBP7.11□□□□□ -1.27
SYNPO2-206ENST00000610556 GJC2Q5T442 439 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms