RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 KLK13Q9UKR3 277 aa16.78■□□□□ 0.28
HDDC2-210ENST00000609574 A0A1W2PQD8 194 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 COCHO43405 550 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 ATICP31939 592 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 TRIP6Q15654 476 aaKnown RBP16.77■□□□□ 0.28
HDDC2-210ENST00000609574 SNRNP35Q16560 246 aaKnown RBP16.77■□□□□ 0.28
HDDC2-210ENST00000609574 WDR45BQ5MNZ6 344 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 CHCHD4Q8N4Q1 142 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 TERB1Q8NA31 727 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 FOXJ1Q92949 421 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 SYAP1Q96A49 352 aaPredicted RBP16.77■□□□□ 0.28
HDDC2-210ENST00000609574 TNIP3Q96KP6 325 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 ZNF518BQ9C0D4 1074 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDDC2-210ENST00000609574 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 WDR35Q9P2L0 1181 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 LSM7Q9UK45 103 aaKnown RBP16.77■□□□□ 0.28
HDDC2-210ENST00000609574 ZFYVE26Q68DK2 2539 aa16.77■□□□□ 0.28
HDDC2-210ENST00000609574 NUP205Q92621 2012 aa16.77■□□□□ 0.27
HDDC2-210ENST00000609574 PTPRJQ12913 1337 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 CLDN5O00501 218 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
HDDC2-210ENST00000609574 IRF1P10914 325 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 GABRG2P18507 467 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 WASP42768 502 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 TUBP50607 506 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
HDDC2-210ENST00000609574 MESP2Q0VG99 397 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 PLEKHG6Q3KR16 790 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 CGRRF1Q99675 332 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 B3GNT5Q9BYG0 378 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 DMAP1Q9NPF5 467 aaPredicted RBP16.76■□□□□ 0.27
HDDC2-210ENST00000609574 FSCN3Q9NQT6 498 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 DNAJC17Q9NVM6 304 aaKnown RBP16.76■□□□□ 0.27
HDDC2-210ENST00000609574 DNAAF2Q9NVR5 837 aaKnown RBP16.76■□□□□ 0.27
HDDC2-210ENST00000609574 CYP8B1Q9UNU6 501 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 STARD13Q9Y3M8 1113 aa16.76■□□□□ 0.27
HDDC2-210ENST00000609574 FAM221BA6H8Z2 402 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
HDDC2-210ENST00000609574 CYP2J2P51589 502 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 PSMD6Q15008 389 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 SNX30Q5VWJ9 437 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 TMEM25Q86YD3 366 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 BBS7Q8IWZ6 715 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 ETFBKMTQ8IXQ9 262 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 PDILTQ8N807 584 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
HDDC2-210ENST00000609574 SMARCD1Q96GM5 515 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 HSPA12BQ96MM6 686 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 DUSP9Q99956 384 aaKnown RBP16.75■□□□□ 0.27
HDDC2-210ENST00000609574 FGFBP2Q9BYJ0 223 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 ZDHHC5Q9C0B5 715 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 FBXO44Q9H4M3 255 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 TLR8Q9NR97 1041 aaKnown RBP16.75■□□□□ 0.27
HDDC2-210ENST00000609574 APOBEC2Q9Y235 224 aaKnown RBP16.75■□□□□ 0.27
HDDC2-210ENST00000609574 GON4LQ3T8J9 2241 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 OBSL1O75147 1896 aa16.75■□□□□ 0.27
HDDC2-210ENST00000609574 IGHV1OR15-9A0A0B4J2B8 117 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 STAU1O95793 577 aaKnown RBP16.74■□□□□ 0.27
HDDC2-210ENST00000609574 P4HA1P13674 534 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 BIRC3Q13489 604 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 E2F5Q15329 346 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 PHTF2Q8N3S3 785 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 KCNK16Q96T55 309 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 BBS2Q9BXC9 721 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 CCSER2Q9H7U1 834 aa16.74■□□□□ 0.27
HDDC2-210ENST00000609574 ANKRD11Q6UB99 2663 aaPredicted RBP16.74■□□□□ 0.27
HDDC2-210ENST00000609574 ASCC3Q8N3C0 2202 aaKnown RBP16.74■□□□□ 0.27
HDDC2-210ENST00000609574 PKD1L2Q7Z442 2459 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 NEDD8-MDP1E9PL57 170 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 AP1G2O75843 785 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 CD59P13987 128 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 HOXB3P14651 431 aaPredicted RBP16.73■□□□□ 0.27
HDDC2-210ENST00000609574 AP3M2P53677 418 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 SLC5A3P53794 718 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 CACNA2D1P54289 1103 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 MYL6P60660 151 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 ASIC1P78348 528 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 CYP24A1Q07973 514 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 STARD3Q14849 445 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 C8orf34Q49A92 452 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 KIAA1324Q6UXG2 1013 aaKnown RBP16.73■□□□□ 0.27
HDDC2-210ENST00000609574 HTR3DQ70Z44 454 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 SCAMP5Q8TAC9 235 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 ZNF419Q96HQ0 510 aaPredicted RBP16.73■□□□□ 0.27
HDDC2-210ENST00000609574 DNAI2Q9GZS0 605 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 CUEDC2Q9H467 287 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 AGPAT3Q9NRZ7 376 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 GMIPQ9P107 970 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 CGNQ9P2M7 1197 aaKnown RBP16.73■□□□□ 0.27
HDDC2-210ENST00000609574 ZZEF1O43149 2961 aa16.73■□□□□ 0.27
HDDC2-210ENST00000609574 A0A1W2PQF6 199 aa16.72■□□□□ 0.27
HDDC2-210ENST00000609574 MEI4A8MW99 385 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms