RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 NEK10Q6ZWH5 1172 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 SETD3Q86TU7 594 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 EXD1Q8NHP7 514 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 GRK7Q8WTQ7 553 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 TBC1D14Q9P2M4 693 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ZSCAN5BA6NJL1 495 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 POLRMTO00411 1230 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 LAD1O00515 517 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 TMCC2O75069 709 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 POLR2EP19388 210 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 KLRK1P26718 216 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ANXA13P27216 316 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 SOX5P35711 763 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 NR4A2P43354 598 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CASP5P51878 434 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MARSP56192 900 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 TUBA1BP68363 451 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 TUBA1AQ71U36 451 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 RHOT2Q8IXI1 618 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 KIAA2013Q8IYS2 634 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ESX1Q8N693 406 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 NLRP7Q8WX94 980 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 RAD54LQ92698 747 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 EGLN2Q96KS0 407 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MECRQ9BV79 373 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 IFT52Q9Y366 437 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 RNF11Q9Y3C5 154 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 SF3B1O75533 1304 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 LOC100653049A0A140TA62 436 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 H0YIN7 160 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 LPXNO60711 386 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 ZMPSTE24O75844 475 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 KRT34O76011 436 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 FYNP06241 537 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 UQCRFS1P1P0C7P4 283 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 STAT3P40763 770 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 GYG1P46976 350 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 TUBA4AP68366 448 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 FAM47AQ5JRC9 791 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 FAM91A1Q658Y4 838 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 GSTA5Q7RTV2 222 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 SLC20A1Q8WUM9 679 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 SGF29Q96ES7 293 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 PI4KBQ9UBF8 816 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 KIAA1257Q9ULG3 409 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 CTDP1Q9Y5B0 961 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 ST14Q9Y5Y6 855 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 ZNF536O15090 1300 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 ARAP2Q8WZ64 1704 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 CYTH3O43739 400 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 GABBR2O75899 941 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 INHBBP09529 407 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 MRPS22P82650 360 aaKnown RBP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 GRIK5Q16478 980 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 PGS1Q32NB8 556 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 C11orf63Q6NUN7 778 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 TDRPQ86YL5 185 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 ELMOD1Q8N336 334 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 TRPC4APQ8TEL6 797 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 UNKQ9C0B0 810 aaKnown RBP13.03□□□□□ -0.32
CTCFL-218ENST00000608440 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 PCDHGA11Q9Y5H2 935 aa13.03□□□□□ -0.32
CTCFL-218ENST00000608440 KMOO15229 486 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 ICMTO60725 284 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 CRYZL1O95825 349 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 ABHD2P08910 425 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 STAT2P52630 851 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 CSE1LP55060 971 aaKnown RBP13.02□□□□□ -0.32
CTCFL-218ENST00000608440 SELENBP1Q13228 472 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 ARHGEF6Q15052 776 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 GPR107Q5VW38 600 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 FAM117BQ6P1L5 589 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 NATD1Q8N6N6 113 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-218ENST00000608440 WNT8AQ9H1J5 351 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 TP63Q9H3D4 680 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-218ENST00000608440 HIPK3Q9H422 1215 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 KCNK4Q9NYG8 393 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 EPS15L1Q9UBC2 864 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 DNAJC12Q9UKB3 198 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 AGO2Q9UKV8 859 aaKnown RBP13.02□□□□□ -0.32
CTCFL-218ENST00000608440 PADI4Q9UM07 663 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms