RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
CTSA-212ENST00000606394 GAD2Q05329 585 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 TYRO3Q06418 890 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 SF3A1Q15459 793 aaKnown RBP14.22□□□□□ -0.13
CTSA-212ENST00000606394 SYCP2LQ5T4T6 812 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 SASS6Q6UVJ0 657 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 LIMS2Q7Z4I7 341 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 ZSCAN30Q86W11 494 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 OSTM1Q86WC4 334 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 C12orf40Q86WS4 652 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 BRSK2Q8IWQ3 736 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 ETFBKMTQ8IXQ9 262 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 CXorf38Q8TB03 319 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 FOXJ1Q92949 421 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 ZNF419Q96HQ0 510 aaPredicted RBP14.22□□□□□ -0.13
CTSA-212ENST00000606394 ZHX3Q9H4I2 956 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 RRAGDQ9NQL2 400 aaPredicted RBP14.22□□□□□ -0.13
CTSA-212ENST00000606394 STARD13Q9Y3M8 1113 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 MYOFQ9NZM1 2061 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 PLXNB3Q9ULL4 1909 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 IGHV1OR15-9A0A0B4J2B8 117 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 HOXC11O43248 304 aaPredicted RBP14.21□□□□□ -0.13
CTSA-212ENST00000606394 LDHAP00338 332 aaKnown RBP14.21□□□□□ -0.13
CTSA-212ENST00000606394 HOXB2P14652 356 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 NTSR1P30989 418 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 UBA7P41226 1012 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 USP46P62068 366 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 KDSRQ06136 332 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 MYO1EQ12965 1108 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 SOWAHAQ2M3V2 549 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 PLEKHG6Q3KR16 790 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 BTBD8Q5XKL5 378 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 TOGARAM2Q6ZUX3 1019 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 ZNF720Q7Z2F6 126 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 SLC41A1Q8IVJ1 513 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 CSGALNACT2Q8N6G5 542 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 TRIML1Q8N9V2 468 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 GLIS3Q8NEA6 775 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 C8orf48Q96LL4 319 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 HSPA12BQ96MM6 686 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 CAMK1GQ96NX5 476 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 SLITRK1Q96PX8 696 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 SYT15Q9BQS2 421 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 BLOC1S4Q9NUP1 217 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 CFAP97Q9P2B7 532 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 DEC1Q9P2X7 70 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 EXOC7Q9UPT5 735 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 NFE2L3Q9Y4A8 694 aa14.21□□□□□ -0.13
CTSA-212ENST00000606394 A0A1W2PQF6 199 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 CBFA2T3O75081 653 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 PLCG1P19174 1290 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 BDNFP23560 247 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 MSNP26038 577 aaKnown RBP14.2□□□□□ -0.14
CTSA-212ENST00000606394 CLCN1P35523 988 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 WDR45BQ5MNZ6 344 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 LY6G5CQ5SRR4 150 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 TERB1Q8NA31 727 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 LINC00301Q8NCQ3 95 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 OR2I1PQ8NGU4 316 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 HNRNPLLQ8WVV9 542 aaKnown RBP14.2□□□□□ -0.14
CTSA-212ENST00000606394 RAD54LQ92698 747 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 MYLPFQ96A32 169 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 BBC3Q96PG8 261 aaPredicted RBP14.2□□□□□ -0.14
CTSA-212ENST00000606394 FAM213AQ9BRX8 229 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 SMPD4Q9NXE4 827 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 RBAKQ9NYW8 714 aaPredicted RBP14.2□□□□□ -0.14
CTSA-212ENST00000606394 RAXQ9Y2V3 346 aa14.2□□□□□ -0.14
CTSA-212ENST00000606394 R3HCC1Q9Y3T6 440 aaKnown RBP14.2□□□□□ -0.14
CTSA-212ENST00000606394 SPTLC2O15270 562 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 TULP3O75386 442 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 PPP1R37O75864 691 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 ZNF883P0CG24 379 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 GARTP22102 1010 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
CTSA-212ENST00000606394 MCM6Q14566 821 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 CAMK4Q16566 473 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 TDRD10Q5VZ19 366 aaKnown RBP14.19□□□□□ -0.14
CTSA-212ENST00000606394 SDE2Q6IQ49 451 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 TMPRSS7Q7RTY8 843 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 RGL4Q8IZJ4 473 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 DEFB119Q8N690 84 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 PNPLA1Q8N8W4 532 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 KRI1Q8N9T8 703 aaKnown RBP14.19□□□□□ -0.14
CTSA-212ENST00000606394 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 MDM1Q8TC05 714 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 KBTBD7Q8WVZ9 684 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 OVCA2Q8WZ82 227 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 LRIG1Q96JA1 1093 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 STRA6Q9BX79 667 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 CD248Q9HCU0 757 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 ZDHHC4Q9NPG8 344 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 CRTAC1Q9NQ79 661 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 CACNA2D2Q9NY47 1150 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 SEL1LQ9UBV2 794 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 SIX4Q9UIU6 781 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 PCOLCE2Q9UKZ9 415 aa14.19□□□□□ -0.14
CTSA-212ENST00000606394 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
CTSA-212ENST00000606394 F8VP50 259 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms