RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CYP4F12Q9HCS2 524 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SNX15Q9NRS6 342 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 RMND1Q9NWS8 449 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 YTHDC2Q9H6S0 1430 aaKnown RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 A0A0B4J269 797 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM227AF5H4B4 570 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 B4GALT4O60513 344 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PLATP00750 562 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 INHBAP08476 426 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TSHRP16473 764 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PSMA4P25789 261 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ANXA13P27216 316 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ACADVLP49748 655 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CCT4P50991 539 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 POLE2P56282 527 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 RBP5P82980 135 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 HTD2P86397 168 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 MC1RQ01726 317 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 BTKQ06187 659 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ADAM9Q13443 819 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TDGQ13569 410 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 DPYSQ14117 519 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SPIDRQ14159 915 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FRG1Q14331 258 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CNN3Q15417 329 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 KCTD21Q4G0X4 260 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 APOA5Q6Q788 366 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF765Q7L2R6 523 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 RAB11FIP2Q7L804 512 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 KRT74Q7RTS7 529 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 MOGAT3Q86VF5 341 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GATAD2AQ86YP4 633 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 IGSF22Q8N9C0 903 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CNBD1Q8NA66 436 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SDCCAG3Q96C92 435 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 IFT43Q96FT9 208 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TMEM169Q96HH4 297 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CLSTN2Q9H4D0 955 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 IGFLR1Q9H665 355 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 DCTPP1Q9H773 170 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 IMPACTQ9P2X3 320 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 MRPL11Q9Y3B7 192 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FADS3Q9Y5Q0 445 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ADCY9O60503 1353 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CLTCL1P53675 1640 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 H7BY64 318 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 EREGO14944 169 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FFAR2O15552 330 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ALDH1A2O94788 518 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 UPP2O95045 317 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PTBP3O95758 552 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 OLFM2O95897 454 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 S100A6P06703 90 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PDGFRAP16234 1089 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GRNP28799 593 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 DOC2AQ14183 400 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TBCCQ15814 346 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CWF19L2Q2TBE0 894 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SV2CQ496J9 727 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 RNF220Q5VTB9 566 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TWF2Q6IBS0 349 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 KIF6Q6ZMV9 814 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 Q6ZNB5 142 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SZRD1Q7Z422 152 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ZDHHC17Q8IUH5 632 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CD302Q8IX05 232 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM20CQ8IXL6 584 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF565Q8N9K5 539 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM71DQ8N9W8 422 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 OR2W6PQ8NHA6 318 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ST8SIA4Q92187 359 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 JADE3Q92613 823 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 AZIN2Q96A70 460 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SNF8Q96H20 258 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 WNK4Q96J92 1243 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PSKH2Q96QS6 385 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SH3GL2Q99962 352 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ERP44Q9BS26 406 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 USP44Q9H0E7 712 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TPK1Q9H3S4 243 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ATP13A2Q9NQ11 1180 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 KIAA1257Q9ULG3 409 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TNRC6CQ9HCJ0 1690 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 IFT172Q9UG01 1749 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 DCDC2CA8MYV0 355 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 NVLO15381 856 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PHACTR2O75167 634 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GSTT2P0CG29 244 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GSTT2BP0CG30 244 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TPBGLP0DKB5 382 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ACRP10323 421 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 RARBP10826 455 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CKBP12277 381 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 CSF2RAP15509 400 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 EIF2S2P20042 333 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GSTT1P30711 240 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PTGS2P35354 604 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PITPNBP48739 271 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms