RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PARVBQ9HBI1 364 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TMBIM4Q9HC24 238 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 MTMR4Q9NYA4 1195 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TNFAIP8O95379 198 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 RAD23AP54725 363 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 PHKG1Q16816 387 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 BOLA3Q53S33 107 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 SLC44A2Q8IWA5 706 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 OTUD5Q96G74 571 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 CENPXA8MT69 81 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TBX3O15119 743 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 KLHL18O94889 574 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 VAC14Q08AM6 782 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 ARHGAP22Q7Z5H3 698 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 FAM9CQ8IZT9 166 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 VPS33AQ96AX1 596 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 BDH2Q9BUT1 245 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 FUT8Q9BYC5 575 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 REXO4Q9GZR2 422 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 THAP2Q9H0W7 228 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 MEI4A8MW99 385 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 KPNA4O00629 521 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 ATP9AO75110 1047 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 IL12RB1P42701 662 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 CUL2Q13617 745 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 NEDD8Q15843 81 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 SNX30Q5VWJ9 437 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 NOTUMQ6P988 496 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 CYP4Z2PQ8N1L4 340 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 CNPY3Q9BT09 278 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TEX13BQ9BXU2 312 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 NARFQ9UHQ1 456 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 SUPT7LO94864 414 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 PSMB9P28065 219 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 PTPN4P29074 926 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 REXO1L1PQ8IX06 675 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 IGDCC4Q8TDY8 1250 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 VMP1Q96GC9 406 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 PARNO95453 639 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 STIP1P31948 543 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 AGKQ53H12 422 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TCHHL1Q5QJ38 904 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 C11orf63Q6NUN7 778 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 WDR36Q8NI36 951 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 NAT9Q9BTE0 207 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TUBE1Q9UJT0 475 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 RUVBL2Q9Y230 463 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 STON1Q9Y6Q2 735 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 CNTFP26441 200 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 FAM98BQ52LJ0 330 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 FAXCQ5TGI0 409 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 LPAR1Q92633 364 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 GTF3C4Q9UKN8 822 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 TBX20Q9UMR3 447 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 ZNF618Q5T7W0 954 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 TRIM48Q8IWZ4 208 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 AVENQ9NQS1 362 aaPredicted RBP9.9□□□□□ -0.83
CSMD1-217ENST00000602723 CHST12Q9NRB3 414 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 SLC25A13Q9UJS0 675 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 IPPQ9Y573 584 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 FLT1P17948 1338 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 ACAD10Q6JQN1 1059 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 KIFC1Q9BW19 673 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 ATAD3AQ9NVI7 634 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 INTS13Q9NVM9 706 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 CHORDC1Q9UHD1 332 aaPredicted RBP9.9□□□□□ -0.83
CSMD1-217ENST00000602723 DNAJC16Q9Y2G8 782 aa9.9□□□□□ -0.83
CSMD1-217ENST00000602723 MGAT4DA6NG13 374 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 FKBP6O75344 327 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 TPP2P29144 1249 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MAGEA10P43363 369 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 CAMK2GQ13555 558 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ZCCHC7Q8N3Z6 543 aaKnown RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PIF1Q9H611 641 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 CYP4F12Q9HCS2 524 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 DAPK2Q9UIK4 370 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 AAR2Q9Y312 384 aaKnown RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 NPHP4O75161 1426 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 DDHD2O94830 711 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MFN2O95140 757 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ATP6V1G2O95670 118 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MUTP22033 750 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 IL5RAQ01344 420 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 TMEM62Q0P6H9 643 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 IKBIPQ70UQ0 350 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 UTP15Q8TED0 518 aaKnown RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 APBB2Q92870 758 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 NCKIPSDQ9NZQ3 722 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 KLHL20Q9Y2M5 609 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 UNC13BO14795 1591 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MFSD4BQ5TF39 518 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ATP8B4Q8TF62 1192 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MYO5BQ9ULV0 1848 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 SERPINH1P50454 418 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms