RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
SSBP4-211ENST00000601614 STARD13Q9Y3M8 1113 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 RAD54BQ9Y620 910 aa17.06■□□□□ 0.32
SSBP4-211ENST00000601614 TRIM66O15016 1216 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 ZNF217O75362 1048 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
SSBP4-211ENST00000601614 DDIT3P35638 169 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 CASP5P51878 434 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 MDH1BQ5I0G3 518 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 TMPRSS7Q7RTY8 843 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 TRMT11Q7Z4G4 463 aaKnown RBP17.05■□□□□ 0.32
SSBP4-211ENST00000601614 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSBP4-211ENST00000601614 BAHD1Q8TBE0 780 aaPredicted RBP17.05■□□□□ 0.32
SSBP4-211ENST00000601614 MRGPRX1Q96LB2 322 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
SSBP4-211ENST00000601614 FGFBP2Q9BYJ0 223 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 SPHK2Q9NRA0 654 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 DKK4Q9UBT3 224 aa17.05■□□□□ 0.32
SSBP4-211ENST00000601614 PRRT4C9JH25 899 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 DKK1O94907 266 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 TMEM191BP0C7N4 346 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 BNC1Q01954 994 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 NUMA1Q14980 2115 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 ANO4Q32M45 955 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
SSBP4-211ENST00000601614 TDRD10Q5VZ19 366 aaKnown RBP17.04■□□□□ 0.32
SSBP4-211ENST00000601614 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 GLIS3Q8NEA6 775 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 OTUB2Q96DC9 234 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
SSBP4-211ENST00000601614 GABRG3Q99928 467 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 ZNF518BQ9C0D4 1074 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 DPEP3Q9H4B8 488 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 PCIF1Q9H4Z3 704 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
SSBP4-211ENST00000601614 INTS13Q9NVM9 706 aa17.04■□□□□ 0.32
SSBP4-211ENST00000601614 KIAA1522Q9P206 1035 aaPredicted RBP17.04■□□□□ 0.32
SSBP4-211ENST00000601614 CLDN5O00501 218 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 C1QL1O75973 258 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 ATXN1LP0C7T5 689 aaKnown RBP17.03■□□□□ 0.32
SSBP4-211ENST00000601614 CYP4F3Q08477 520 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 MAPRE1Q15691 268 aaKnown RBP17.03■□□□□ 0.32
SSBP4-211ENST00000601614 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 HS2ST1Q7LGA3 356 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 CHPFQ8IZ52 775 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
SSBP4-211ENST00000601614 NOC3LQ8WTT2 800 aaKnown RBP17.03■□□□□ 0.32
SSBP4-211ENST00000601614 SLITRK1Q96PX8 696 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 CCSER2Q9H7U1 834 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 MRPL44Q9H9J2 332 aaKnown RBP17.03■□□□□ 0.32
SSBP4-211ENST00000601614 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 SUSD2Q9UGT4 822 aa17.03■□□□□ 0.32
SSBP4-211ENST00000601614 FNDC3AQ9Y2H6 1198 aaKnown RBP17.03■□□□□ 0.32
SSBP4-211ENST00000601614 TP53BP1Q12888 1972 aaPredicted RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 TRABD2BA6NFA1 517 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 EIF4E1BA6NMX2 242 aaKnown RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 WASH3PC4AMC7 463 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 NDUFS2O75306 463 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 LDHAP00338 332 aaKnown RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 IRF1P10914 325 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 GNSP15586 552 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 GARTP22102 1010 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 PGFP49763 221 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 MYO1EQ12965 1108 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 CAMK2BQ13554 666 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 SYCP2LQ5T4T6 812 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 SETD7Q8WTS6 366 aaKnown RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 DNASE2BQ8WZ79 361 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 ACCSQ96QU6 501 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 DNAJC17Q9NVM6 304 aaKnown RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 CHORDC1Q9UHD1 332 aaPredicted RBP17.02■□□□□ 0.32
SSBP4-211ENST00000601614 SH3BP1Q9Y3L3 701 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 CKAP5Q14008 2032 aa17.02■□□□□ 0.32
SSBP4-211ENST00000601614 MUC22E2RYF6 1773 aaPredicted RBP17.02■□□□□ 0.31
SSBP4-211ENST00000601614 KNTC1P50748 2209 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 A0A087WV48 116 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 A0A1B0GTW7 788 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 FAM149AA5PLN7 773 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 GREM1O60565 184 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 GCNT3O95395 438 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 YWHAQP27348 245 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 WDR45BQ5MNZ6 344 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 GRAMD4Q6IC98 578 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 KIAA1324Q6UXG2 1013 aaKnown RBP17.01■□□□□ 0.31
SSBP4-211ENST00000601614 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 RASSF8Q8NHQ8 419 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 SCAMP5Q8TAC9 235 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 FOXJ1Q92949 421 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 DNAJC19Q96DA6 116 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 P2RY11Q96G91 374 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 ANKRD36BP1Q96IX9 119 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 MMS19Q96T76 1030 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 KIF2CQ99661 725 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
SSBP4-211ENST00000601614 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 ZDHHC5Q9C0B5 715 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms