RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TCP11X2Q5H9J9 407 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 HECTD3Q5T447 861 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 CCDC183Q5T5S1 534 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 TMEM270Q6UE05 265 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 ZNF852Q6ZMS4 543 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 TPRG1Q6ZUI0 275 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 C11orf57Q6ZUT1 292 aaPredicted RBP9.27□□□□□ -0.93
SSBP4-208ENST00000600628 RRAGAQ7L523 313 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 PIGZQ86VD9 579 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 YAF2Q8IY57 180 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 ADGRG2Q8IZP9 1017 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 PPM1KQ8N3J5 372 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 SH3RF2Q8TEC5 729 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 FBXO32Q969P5 355 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 FAM81BQ96LP2 452 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 TUBGCP2Q9BSJ2 902 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 MED10Q9BTT4 135 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 NDST4Q9H3R1 872 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 CCSER2Q9H7U1 834 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 NMUR1Q9HB89 426 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 GMIPQ9P107 970 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 CHORDC1Q9UHD1 332 aaPredicted RBP9.27□□□□□ -0.93
SSBP4-208ENST00000600628 AJAP1Q9UKB5 411 aaPredicted RBP9.27□□□□□ -0.93
SSBP4-208ENST00000600628 TSPAN16Q9UKR8 245 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 PIAS3Q9Y6X2 628 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 ATG2BQ96BY7 2078 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 A0A0A0MRY4 1105 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 E2F8A0AVK6 867 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 PROB1E7EW31 1015 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 SPECC1L-ADORA2AF8WAN1 911 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 LEFTY2O00292 366 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 TRDMT1O14717 391 aaKnown RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 CYP26A1O43174 497 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 TLR5O60602 858 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 CLSTN1O94985 981 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 PAPSS2O95340 614 aaPredicted RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 CKMP06732 381 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 SETSIPP0DME0 302 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 ARSAP15289 507 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 GPD2P43304 727 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 PSEN1P49768 467 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 PDE4CQ08493 712 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 BST2Q10589 180 aaKnown RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 LRMPQ12912 555 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 UBXN2BQ14CS0 331 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 PDGFRLQ15198 375 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 ANGPT1Q15389 498 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 ITPRIPL2Q3MIP1 535 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 VWA3BQ502W6 1294 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 GBP6Q6ZN66 633 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 ALYREFQ86V81 257 aaKnown RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 FAM114A1Q8IWE2 563 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 STK32AQ8WU08 396 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 EZH1Q92800 747 aaPredicted RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 WBP2Q969T9 261 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 CRACR2AQ9BSW2 395 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 IER2Q9BTL4 223 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 KLF16Q9BXK1 252 aaPredicted RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 DNAI2Q9GZS0 605 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 CHRDQ9H2X0 955 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 TLR8Q9NR97 1041 aaKnown RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 FAM86C1Q9NVL1 165 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 THG1LQ9NWX6 298 aaKnown RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 MRPS17Q9Y2R5 130 aaKnown RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 NFE2L3Q9Y4A8 694 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 CPQQ9Y646 472 aa9.26□□□□□ -0.93
SSBP4-208ENST00000600628 EP300Q09472 2414 aaPredicted RBP9.26□□□□□ -0.93
SSBP4-208ENST00000600628 A0A1W2PQH9 124 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 KCNJ18B7U540 433 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 GFRA2O00451 464 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 NCAM2O15394 837 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 CALCAP01258 141 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 TRIM21P19474 475 aaKnown RBP9.25□□□□□ -0.93
SSBP4-208ENST00000600628 GJA4P35212 333 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 CLCN1P35523 988 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 SOX9P48436 509 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 MRE11P49959 708 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 KCNJ12Q14500 433 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 KRT31Q15323 416 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 STX1AQ16623 288 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 KLHL40Q2TBA0 621 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 KLHDC7AQ5VTJ3 777 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 TRIM68Q6AZZ1 485 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 PMF1Q6P1K2 205 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 GJB7Q6PEY0 223 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 Q6ZNB5 142 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 HTR3DQ70Z44 454 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 C1orf210Q8IVY1 113 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 FAM71AQ8IYT1 594 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 PHTF2Q8N3S3 785 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 SYNPOQ8N3V7 929 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
SSBP4-208ENST00000600628 CSGALNACT1Q8TDX6 532 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 FAM3CQ92520 227 aa9.25□□□□□ -0.93
SSBP4-208ENST00000600628 ATP2A3Q93084 1043 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms