RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SH3BP1Q9Y3L3 701 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 PCDHB4Q9Y5E5 795 aa23.82■■□□□ 1.4
CCDC9-204ENST00000599398 PTPRZ1P23471 2315 aaPredicted RBP23.81■■□□□ 1.4
CCDC9-204ENST00000599398 MYOFQ9NZM1 2061 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 A0A1W2PQH9 124 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 PRR23AA6NEV1 266 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 IRF1P10914 325 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 CXCL12P48061 93 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 GALK1P51570 392 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 SATB1Q01826 763 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 FSTL4Q6MZW2 842 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 RRAGAQ7L523 313 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 SYNPOQ8N3V7 929 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 UBR7Q8N806 425 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 KIAA1958Q8N8K9 716 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 LMO3Q8TAP4 145 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 KAT5Q92993 513 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 ZFRQ96KR1 1074 aaKnown RBP23.81■■□□□ 1.4
CCDC9-204ENST00000599398 NMUR1Q9HB89 426 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 NAGPAQ9UK23 515 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 TSPAN16Q9UKR8 245 aa23.81■■□□□ 1.4
CCDC9-204ENST00000599398 TBX18O95935 607 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 VDRP11473 427 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 ATP5C1P36542 298 aaKnown RBP23.8■■□□□ 1.4
CCDC9-204ENST00000599398 MAMSTRQ6ZN01 415 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 PIGZQ86VD9 579 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 TTC30AQ86WT1 665 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 ARHGEF19Q8IW93 802 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 ATRIPQ8WXE1 791 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 CD101Q93033 1021 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 MED15Q96RN5 788 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 INTS2Q9H0H0 1204 aaKnown RBP23.8■■□□□ 1.4
CCDC9-204ENST00000599398 SEMA4AQ9H3S1 761 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 FBRSL1Q9HCM7 1045 aaKnown RBP23.8■■□□□ 1.4
CCDC9-204ENST00000599398 OSER1Q9NX31 292 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 TBC1D14Q9P2M4 693 aa23.8■■□□□ 1.4
CCDC9-204ENST00000599398 FAM186AA6NE01 2351 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 E2F8A0AVK6 867 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 EGFP01133 1207 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 CYP17A1P05093 508 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 RARGP13631 454 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 DRD1P21728 446 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 BCAT1P54687 386 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 CCDC186Q7Z3E2 898 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 ADGRG2Q8IZP9 1017 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 UBXN6Q9BZV1 441 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 CYLDQ9NQC7 956 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 ZSCAN32Q9NX65 697 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 NUDT5Q9UKK9 219 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 KIAA1257Q9ULG3 409 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 PCDHGA2Q9Y5H1 932 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 USP3Q9Y6I4 520 aa23.79■■□□□ 1.4
CCDC9-204ENST00000599398 PSEN1P49768 467 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 PDE4CQ08493 712 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 GOLGA8FQ08AF8 430 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 GOLGA8DPQ0D2H9 430 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 BST2Q10589 180 aaKnown RBP23.78■■□□□ 1.4
CCDC9-204ENST00000599398 DHCR24Q15392 516 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 DPCR1Q3MIW9 517 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 C10orf120Q5SQS8 335 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 UBA3Q8TBC4 463 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.78■■□□□ 1.4
CCDC9-204ENST00000599398 DACH1Q9UI36 760 aa23.78■■□□□ 1.4
CCDC9-204ENST00000599398 TULP2O00295 520 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 XPO1O14980 1071 aaKnown RBP23.77■■□□□ 1.4
CCDC9-204ENST00000599398 MDM4O15151 490 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 ADH1CP00326 375 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 LMNAP02545 664 aaKnown RBP23.77■■□□□ 1.4
CCDC9-204ENST00000599398 PAEPP09466 180 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 RALAP11233 206 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 MTIF2P46199 727 aaKnown RBP23.77■■□□□ 1.4
CCDC9-204ENST00000599398 TKTL1P51854 596 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 NRLP54845 237 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 GCNT1Q02742 428 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 SCD5Q86SK9 330 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 TADA2BQ86TJ2 420 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 RBBP8NLQ8NC74 664 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-204ENST00000599398 FAM126AQ9BYI3 521 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-204ENST00000599398 DNMT3LQ9UJW3 386 aa23.77■■□□□ 1.4
CCDC9-204ENST00000599398 GOLGA6L22H0YM25 854 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 O00370 1275 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 RNF40O75150 1001 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 RAB41Q5JT25 222 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 BBS7Q8IWZ6 715 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 TFAP2BQ92481 460 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 WBP2Q969T9 261 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 OTUB2Q96DC9 234 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 IPO9Q96P70 1041 aaKnown RBP23.76■■□□□ 1.39
CCDC9-204ENST00000599398 CRACR2AQ9BSW2 395 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 KLF16Q9BXK1 252 aaPredicted RBP23.76■■□□□ 1.39
CCDC9-204ENST00000599398 LRRC4Q9HBW1 653 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 C2orf42Q9NWW7 574 aa23.76■■□□□ 1.39
CCDC9-204ENST00000599398 LSM7Q9UK45 103 aaKnown RBP23.76■■□□□ 1.39
CCDC9-204ENST00000599398 RNF225M0QZC1 329 aaPredicted RBP23.75■■□□□ 1.39
CCDC9-204ENST00000599398 ADH5P11766 374 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 TDGF1P13385 188 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 KRT5P13647 590 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 BRD2P25440 801 aaKnown RBP23.75■■□□□ 1.39
CCDC9-204ENST00000599398 OPRD1P41143 372 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 FBXO43Q4G163 708 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms