RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TLR8Q9NR97 1041 aaKnown RBP18.02■□□□□ 0.48
PNKP-210ENST00000597965 SPHK2Q9NRA0 654 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 IL37Q9NZH6 218 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 CHORDC1Q9UHD1 332 aaPredicted RBP18.02■□□□□ 0.48
PNKP-210ENST00000597965 PLXND1Q9Y4D7 1925 aa18.02■□□□□ 0.47
PNKP-210ENST00000597965 CEP295Q9C0D2 2601 aa18.02■□□□□ 0.47
PNKP-210ENST00000597965 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 FAM92AA1XBS5 289 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 K7ELQ4 463 aaPredicted RBP18.01■□□□□ 0.47
PNKP-210ENST00000597965 POLR2DO15514 142 aaKnown RBP18.01■□□□□ 0.47
PNKP-210ENST00000597965 TULP3O75386 442 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 RPN1P04843 607 aaKnown RBP18.01■□□□□ 0.47
PNKP-210ENST00000597965 CLDN10P78369 228 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 FOXC1Q12948 553 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 NCOA4Q13772 614 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 SGSM1Q2NKQ1 1148 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 UAP1L1Q3KQV9 507 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 C12orf40Q86WS4 652 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 ETFBKMTQ8IXQ9 262 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 TMEFF1Q8IYR6 380 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 CEP57L1Q8IYX8 460 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 TMEM174Q8WUU8 243 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 ZNF516Q92618 1163 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 TAF4BQ92750 862 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 KCNK16Q96T55 309 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.47
PNKP-210ENST00000597965 TMEM30AQ9NV96 361 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 LSM7Q9UK45 103 aaKnown RBP18.01■□□□□ 0.47
PNKP-210ENST00000597965 STARD13Q9Y3M8 1113 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 NME7Q9Y5B8 376 aa18.01■□□□□ 0.47
PNKP-210ENST00000597965 MYOFQ9NZM1 2061 aa18■□□□□ 0.47
PNKP-210ENST00000597965 PATE3B3GLJ2 98 aa18■□□□□ 0.47
PNKP-210ENST00000597965 ADAM23O75077 832 aa18■□□□□ 0.47
PNKP-210ENST00000597965 ZNF217O75362 1048 aa18■□□□□ 0.47
PNKP-210ENST00000597965 AP1G2O75843 785 aa18■□□□□ 0.47
PNKP-210ENST00000597965 ZDHHC11BP0C7U3 371 aa18■□□□□ 0.47
PNKP-210ENST00000597965 NTSR1P30989 418 aa18■□□□□ 0.47
PNKP-210ENST00000597965 DUOXA1Q1HG43 343 aa18■□□□□ 0.47
PNKP-210ENST00000597965 MAP7D1Q3KQU3 841 aa18■□□□□ 0.47
PNKP-210ENST00000597965 C10orf76Q5T2E6 689 aa18■□□□□ 0.47
PNKP-210ENST00000597965 ATL3Q6DD88 541 aa18■□□□□ 0.47
PNKP-210ENST00000597965 SHC4Q6S5L8 630 aa18■□□□□ 0.47
PNKP-210ENST00000597965 UNC93AQ86WB7 457 aa18■□□□□ 0.47
PNKP-210ENST00000597965 HDDC3Q8N4P3 179 aa18■□□□□ 0.47
PNKP-210ENST00000597965 TERB1Q8NA31 727 aa18■□□□□ 0.47
PNKP-210ENST00000597965 SCAMP5Q8TAC9 235 aa18■□□□□ 0.47
PNKP-210ENST00000597965 PARD3BQ8TEW8 1205 aa18■□□□□ 0.47
PNKP-210ENST00000597965 RLN3Q8WXF3 142 aa18■□□□□ 0.47
PNKP-210ENST00000597965 ZFRQ96KR1 1074 aaKnown RBP18■□□□□ 0.47
PNKP-210ENST00000597965 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
PNKP-210ENST00000597965 KRT82Q9NSB4 513 aa18■□□□□ 0.47
PNKP-210ENST00000597965 WDR35Q9P2L0 1181 aa18■□□□□ 0.47
PNKP-210ENST00000597965 ZFHX4Q86UP3 3567 aa18■□□□□ 0.47
PNKP-210ENST00000597965 MYO18AQ92614 2054 aaKnown RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 UPK3BL1B0FP48 263 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 UPK3BL2E5RIL1 263 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 SCAMP3O14828 347 aaKnown RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 GIPC1O14908 333 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 TLR5O60602 858 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 HOXB2P14652 356 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 ENGP17813 658 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 ATP5C1P36542 298 aaKnown RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 RPL6Q02878 288 aaKnown RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 GFPT1Q06210 699 aaPredicted RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 EMC10Q5UCC4 262 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 PEAR1Q5VY43 1037 aaPredicted RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 HTR3DQ70Z44 454 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 TADA2BQ86TJ2 420 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 BBS7Q8IWZ6 715 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 PHTF2Q8N3S3 785 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 NAT16Q8N8M0 369 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 KDF1Q8NAX2 398 aaPredicted RBP17.99■□□□□ 0.47
PNKP-210ENST00000597965 ADAM33Q9BZ11 813 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 SMYD3Q9H7B4 428 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 CCSER2Q9H7U1 834 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 PILRBQ9UKJ0 227 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 CFAP47Q6ZTR5 3102 aa17.99■□□□□ 0.47
PNKP-210ENST00000597965 PI4KAP42356 2102 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 IKBKBO14920 756 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 HNRNPLP14866 589 aaKnown RBP eCLIP17.98■□□□□ 0.47
PNKP-210ENST00000597965 PTGER3P43115 390 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 ME1P48163 572 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 CDH8P55286 799 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 HNRNPDQ14103 355 aaKnown RBP17.98■□□□□ 0.47
PNKP-210ENST00000597965 E2F5Q15329 346 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 GRAMD4Q6IC98 578 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 ARMCX6Q7L4S7 300 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 ACOT1Q86TX2 421 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 FUKQ8N0W3 1084 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 CRYBG2Q8N1P7 616 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 IMPG2Q9BZV3 1241 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 BLZF1Q9H2G9 400 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 CSNK1G1Q9HCP0 422 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 GMIPQ9P107 970 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 MBD1Q9UIS9 605 aaPredicted RBP17.98■□□□□ 0.47
PNKP-210ENST00000597965 CFAP45Q9UL16 551 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 SLC6A14Q9UN76 642 aa17.98■□□□□ 0.47
PNKP-210ENST00000597965 MYH10P35580 1976 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms