RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SLC8A2Q9UPR5 921 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 SH3BP1Q9Y3L3 701 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 RIF1Q5UIP0 2472 aaKnown RBP15.91■□□□□ 0.14
LIG1-215ENST00000597901 K7EQS6 105 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 BIN1O00499 593 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 TLR5O60602 858 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 ATP5C1P36542 298 aaKnown RBP15.9■□□□□ 0.14
LIG1-215ENST00000597901 LRMPQ12912 555 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 SRSF5Q13243 272 aaKnown RBP15.9■□□□□ 0.14
LIG1-215ENST00000597901 CUL2Q13617 745 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 SIM2Q14190 667 aaPredicted RBP15.9■□□□□ 0.14
LIG1-215ENST00000597901 LPAL2Q16609 132 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 ARHGAP17Q68EM7 881 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 WDR5BQ86VZ2 330 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 CAMKK1Q8N5S9 505 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 NELFBQ8WX92 580 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 OTUB2Q96DC9 234 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 KLF16Q9BXK1 252 aaPredicted RBP15.9■□□□□ 0.14
LIG1-215ENST00000597901 NMUR1Q9HB89 426 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 CYLDQ9NQC7 956 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 USP3Q9Y6I4 520 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 DENND4CQ5VZ89 1909 aa15.9■□□□□ 0.14
LIG1-215ENST00000597901 A0A0A0MRY4 1105 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 A0A1W2PQH9 124 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 PMM2O15305 246 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 CYP26A1O43174 497 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 RARGP13631 454 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 PXNP49023 591 aaPredicted RBP15.89■□□□□ 0.13
LIG1-215ENST00000597901 FMO5P49326 533 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 LY6G5CQ5SRR4 150 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 FOXR2Q6PJQ5 311 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 PRR23BQ6ZRT6 265 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 HTR3DQ70Z44 454 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 SYT13Q7L8C5 426 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 SCD5Q86SK9 330 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 BBS7Q8IWZ6 715 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 ANKRD52Q8NB46 1076 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 RPLP0P6Q8NHW5 317 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 CCDC26Q8TAB7 109 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 PNKPQ96T60 521 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 GMEB2Q9UKD1 530 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 GREB1Q4ZG55 1949 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 PATJQ8NI35 1801 aa15.89■□□□□ 0.13
LIG1-215ENST00000597901 CCDC163A0A0D9SF12 145 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 BICDL2A1A5D9 508 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 ANTXRLA6NF34 631 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 GREM1O60565 184 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 ADH1CP00326 375 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 IRF1P10914 325 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 PLA2G4AP47712 749 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 GAD2Q05329 585 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 CCDC40Q4G0X9 1142 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 CCDC186Q7Z3E2 898 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 ZNF276Q8N554 614 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 USP33Q8TEY7 942 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.88■□□□□ 0.13
LIG1-215ENST00000597901 CHMP5Q9NZZ3 219 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 NUDT5Q9UKK9 219 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 PTPRDP23468 1912 aa15.88■□□□□ 0.13
LIG1-215ENST00000597901 OBSL1O75147 1896 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 ADH5P11766 374 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 SDHBP21912 280 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 TGM1P22735 817 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 PSEN1P49768 467 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 STX17P56962 302 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 YWHAEP62258 255 aaKnown RBP15.87■□□□□ 0.13
LIG1-215ENST00000597901 MESP2Q0VG99 397 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 C2orf27AQ580R0 203 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 LAIR1Q6GTX8 287 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 KLHDC10Q6PID8 442 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 CEP68Q76N32 757 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 PIGZQ86VD9 579 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 TMEM25Q86YD3 366 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 UBR7Q8N806 425 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
LIG1-215ENST00000597901 SPHK2Q9NRA0 654 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 CLIC5Q9NZA1 410 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 DNMT3LQ9UJW3 386 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 NAGPAQ9UK23 515 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 KIAA1257Q9ULG3 409 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 ANAPC1Q9H1A4 1944 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 FAM186AA6NE01 2351 aa15.87■□□□□ 0.13
LIG1-215ENST00000597901 VPS13AQ96RL7 3174 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 MDM4O15151 490 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 P4HA2O15460 535 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 KAT7O95251 611 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 GNA14O95837 355 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 RETP07949 1114 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 RALAP11233 206 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 VDRP11473 427 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 TBXAS1P24557 533 aaPredicted RBP15.86■□□□□ 0.13
LIG1-215ENST00000597901 EIF2DP41214 584 aaKnown RBP15.86■□□□□ 0.13
LIG1-215ENST00000597901 GRIA2P42262 883 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 SEC13P55735 322 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 SLC8A3P57103 927 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 UBE2HP62256 183 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 DMC1Q14565 340 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 PUM1Q14671 1186 aaKnown RBP eCLIP15.86■□□□□ 0.13
LIG1-215ENST00000597901 CAMK4Q16566 473 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms