RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 SEC24AO95486 1093 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 LRG1P02750 347 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 C8AP07357 584 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 HOXB8P17481 243 aaPredicted RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 NOS2P35228 1153 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 MATKP42679 507 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 PTPN9P43378 593 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 RGS7P49802 495 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 ZNF143P52747 638 aaPredicted RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 YWHAZP63104 245 aaKnown RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 NNTQ13423 1086 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 COL19A1Q14993 1142 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 ACBD5Q5T8D3 534 aaPredicted RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 FAM102AQ5T9C2 384 aaPredicted RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 OR6B2Q6IFH4 312 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 DCUN1D2Q6PH85 259 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 BHLHA9Q7RTU4 235 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 EFHBQ8N7U6 833 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 KHSRPQ92945 711 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 NT5C3BQ969T7 300 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 PGAP3Q96FM1 320 aaPredicted RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 GUCD1Q96NT3 240 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 DDX23Q9BUQ8 820 aaKnown RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 NUP85Q9BW27 656 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 ULBP1Q9BZM6 244 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 TLE6Q9H808 572 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 TLR8Q9NR97 1041 aaKnown RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 ABCC13Q9NSE7 274 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 OLA1Q9NTK5 396 aaKnown RBP9.2□□□□□ -0.94
SNRPA-202ENST00000596860 CTTNBP2NLQ9P2B4 639 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 STAP1Q9ULZ2 295 aa9.2□□□□□ -0.94
SNRPA-202ENST00000596860 LAMA3Q16787 3333 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 EPOPA6NHQ4 379 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 ENDOD1O94919 500 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 F9P00740 461 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 LTFP02788 710 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 LCP1P13796 627 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 HMGA1P17096 107 aaKnown RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 GPD1P21695 349 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 DDX6P26196 483 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 CDC25CP30307 473 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 PCK1P35558 622 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 KPNA1P52294 538 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 AIF1P55008 147 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 TWF1Q12792 350 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 DDR2Q16832 855 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 PPM1LQ5SGD2 360 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 MSANTD2Q6P1R3 559 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 NYAP1Q6ZVC0 841 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 STRADAQ7RTN6 431 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 BNIPLQ7Z465 357 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 DNAJB7Q7Z6W7 309 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 TTC9BQ8N6N2 239 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 KIAA1958Q8N8K9 716 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 LRRC57Q8N9N7 239 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 STKLD1Q8NE28 680 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 TPCN2Q8NHX9 752 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 SLC7A14Q8TBB6 771 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 GDPD5Q8WTR4 605 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 CENPIQ92674 756 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 ARHGEF26Q96DR7 871 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 ZNF512Q96ME7 567 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 CNPY3Q9BT09 278 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 COL25A1Q9BXS0 654 aaPredicted RBP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 PRKD2Q9BZL6 878 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 SFXN1Q9H9B4 322 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 MAN1C1Q9NR34 630 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNRPA-202ENST00000596860 ANAPC7Q9UJX3 599 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 PAXBP1Q9Y5B6 917 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 HCFC2Q9Y5Z7 792 aa9.19□□□□□ -0.94
SNRPA-202ENST00000596860 MIF4GDA9UHW6 222 aaKnown RBP9.18□□□□□ -0.94
SNRPA-202ENST00000596860 ESPNB1AK53 854 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 PROSCO94903 275 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 IGLV3-25P01717 112 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 USP17L7P0C7H9 530 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 RALAP11233 206 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 WEE1P30291 646 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 SDC4P31431 198 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 CA8P35219 290 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 RFC1P35251 1148 aaPredicted RBP9.18□□□□□ -0.94
SNRPA-202ENST00000596860 NOP2P46087 812 aaKnown RBP9.18□□□□□ -0.94
SNRPA-202ENST00000596860 YWHAGP61981 247 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNRPA-202ENST00000596860 TAF12Q16514 161 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 SLC25A52Q3SY17 297 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 CYP4A22Q5TCH4 519 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 LRRC38Q5VT99 294 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 BSPRYQ5W0U4 402 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 POLNQ7Z5Q5 900 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 VSIG1Q86XK7 387 aa9.18□□□□□ -0.94
SNRPA-202ENST00000596860 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
SNRPA-202ENST00000596860 SCAMP5Q8TAC9 235 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms