RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ULBP1Q9BZM6 244 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 UBXN6Q9BZV1 441 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 PDCL3Q9H2J4 239 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 TSPY26PQ9H489 355 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 PNPLA8Q9NP80 782 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 ST7Q9NRC1 585 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 HEBP1Q9NRV9 189 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 IL37Q9NZH6 218 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 CNTN6Q9UQ52 1028 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 SCML2Q9UQR0 700 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 CPQQ9Y646 472 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 PKD1L2Q7Z442 2459 aa11.67□□□□□ -0.54
LIG1-211ENST00000596457 COL4A3Q01955 1670 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 KRBA1A5PL33 1030 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 LRRC10BA6NIK2 292 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 LEFTY2O00292 366 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 SCAMP3O14828 347 aaKnown RBP11.66□□□□□ -0.54
LIG1-211ENST00000596457 MDM4O15151 490 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 COCHO43405 550 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 GFPT2O94808 682 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 TBX18O95935 607 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 ZBED1O96006 694 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 RARGP13631 454 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 WEE1P30291 646 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 KRT9P35527 623 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 CLCN5P51795 746 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 PFKPQ01813 784 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 ARHGAP29Q52LW3 1261 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 TRIM68Q6AZZ1 485 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 PMF1Q6P1K2 205 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
LIG1-211ENST00000596457 SLC47A2Q86VL8 602 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 IRF7Q92985 503 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 STK33Q9BYT3 514 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 MIS12Q9H081 205 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 GANQ9H2C0 597 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 NMUR1Q9HB89 426 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 SLC2A4RGQ9NR83 387 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 GKN1Q9NS71 199 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 OSER1Q9NX31 292 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 WNT16Q9UBV4 365 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 SIK3Q9Y2K2 1263 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 KMT2EQ8IZD2 1858 aa11.66□□□□□ -0.54
LIG1-211ENST00000596457 FAM92AA1XBS5 289 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 EPHB6O15197 1021 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 CHADO15335 359 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 TLR5O60602 858 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 OAS1P00973 400 aaKnown RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 ZDHHC11BP0C7U3 371 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 RALAP11233 206 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 CD72P21854 359 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 ATP5C1P36542 298 aaKnown RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 PLA2G4AP47712 749 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 KPNA1P52294 538 aaPredicted RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 YWHAGP61981 247 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIG1-211ENST00000596457 FANCCQ00597 558 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 TNK2Q07912 1038 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 MTF1Q14872 753 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 MLF2Q15773 248 aaPredicted RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 PKDCCQ504Y2 493 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 RAB41Q5JT25 222 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 C10orf120Q5SQS8 335 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 BTBD8Q5XKL5 378 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 TPRG1Q6ZUI0 275 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 ERMP1Q7Z2K6 904 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 CCDC186Q7Z3E2 898 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 CACNA2D4Q7Z3S7 1137 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 SCD5Q86SK9 330 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 RNF214Q8ND24 703 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 RIN3Q8TB24 985 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 SLC35F5Q8WV83 523 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 NAP1L5Q96NT1 182 aaPredicted RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 NAA15Q9BXJ9 866 aaKnown RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 EBF3Q9H4W6 596 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 ARHGEF3Q9NR81 526 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 DUS2Q9NX74 493 aaKnown RBP11.65□□□□□ -0.54
LIG1-211ENST00000596457 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 RASAL2Q9UJF2 1139 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 SH3BP1Q9Y3L3 701 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 USP3Q9Y6I4 520 aa11.65□□□□□ -0.54
LIG1-211ENST00000596457 EPG5Q9HCE0 2579 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 F8VZ95 297 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 CAVIN2O95810 425 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 HMBSP08397 361 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ARSAP15289 507 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 PFKLP17858 780 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 GPD2P43304 727 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 SOX9P48436 509 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 IFNAR2P48551 515 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 UBASH3AP57075 661 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 BPIFB4P59827 614 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms