RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 SNX30Q5VWJ9 437 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 KIAA1211LQ6NV74 962 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 TRMT11Q7Z4G4 463 aaKnown RBP19.76■□□□□ 0.75
PDE4C-208ENST00000595343 BBS7Q8IWZ6 715 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 NELFCDQ8IXH7 590 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 ZNF513Q8N8E2 541 aaPredicted RBP19.76■□□□□ 0.75
PDE4C-208ENST00000595343 KCNV2Q8TDN2 545 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 CUEDC2Q9H467 287 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 CCSER2Q9H7U1 834 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 SPHK2Q9NRA0 654 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 DEC1Q9P2X7 70 aa19.76■□□□□ 0.75
PDE4C-208ENST00000595343 SPEGQ15772 3267 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 PKD1L2Q7Z442 2459 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 AP5Z1O43299 807 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 GABRG2P18507 467 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 TUBP50607 506 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 SLC5A3P53794 718 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 SNRPFP62306 86 aaKnown RBP19.75■□□□□ 0.75
PDE4C-208ENST00000595343 AMPD3Q01432 767 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 PREPLQ4J6C6 727 aaPredicted RBP19.75■□□□□ 0.75
PDE4C-208ENST00000595343 CNNM4Q6P4Q7 775 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 PAQR9Q6ZVX9 377 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 PIP4P1Q86T03 277 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 FAM35AQ86V20 835 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 TMEM25Q86YD3 366 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 SYAP1Q96A49 352 aaPredicted RBP19.75■□□□□ 0.75
PDE4C-208ENST00000595343 DUSP9Q99956 384 aaKnown RBP19.75■□□□□ 0.75
PDE4C-208ENST00000595343 MED10Q9BTT4 135 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 FSCN3Q9NQT6 498 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 IL37Q9NZH6 218 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 HCN2Q9UL51 889 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 SLC6A14Q9UN76 642 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 MTMR6Q9Y217 621 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 ATP8B3O60423 1300 aa19.75■□□□□ 0.75
PDE4C-208ENST00000595343 UPK3BL1B0FP48 263 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 UPK3BL2E5RIL1 263 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 HYAL3O43820 417 aaPredicted RBP19.74■□□□□ 0.75
PDE4C-208ENST00000595343 ZDHHC11BP0C7U3 371 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 CDH8P55286 799 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 RPL6Q02878 288 aaKnown RBP19.74■□□□□ 0.75
PDE4C-208ENST00000595343 SEMA3BQ13214 749 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 STK38Q15208 465 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 DUOXA1Q1HG43 343 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 ANO4Q32M45 955 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 C10orf76Q5T2E6 689 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 SLC36A4Q6YBV0 504 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 NUDT18Q6ZVK8 323 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 DEFB119Q8N690 84 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 TERB1Q8NA31 727 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 LINC00301Q8NCQ3 95 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 CEP76Q8TAP6 659 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 SCFD1Q8WVM8 642 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 WBP2Q969T9 261 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 DHX58Q96C10 678 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 SMYD3Q9H7B4 428 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 DMAP1Q9NPF5 467 aaPredicted RBP19.74■□□□□ 0.75
PDE4C-208ENST00000595343 GMIPQ9P107 970 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 NEUROG3Q9Y4Z2 214 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 UBE4BO95155 1302 aa19.74■□□□□ 0.75
PDE4C-208ENST00000595343 SPAARA0A1B0GVQ0 90 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 FAM92AA1XBS5 289 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 TRIM24O15164 1050 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 PHACTR2O75167 634 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 NTSR1P30989 418 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 WASP42768 502 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 ATXN3P54252 364 aaPredicted RBP19.73■□□□□ 0.75
PDE4C-208ENST00000595343 SIM1P81133 766 aaPredicted RBP19.73■□□□□ 0.75
PDE4C-208ENST00000595343 GFPT1Q06210 699 aaPredicted RBP19.73■□□□□ 0.75
PDE4C-208ENST00000595343 MIB1Q86YT6 1006 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 TNIP3Q96KP6 325 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 GTPBP2Q9BX10 602 aaKnown RBP19.73■□□□□ 0.75
PDE4C-208ENST00000595343 ZSCAN16Q9H4T2 348 aaPredicted RBP19.73■□□□□ 0.75
PDE4C-208ENST00000595343 VRTNQ9H8Y1 702 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 COMMD8Q9NX08 183 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 CALCOCO1Q9P1Z2 691 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 STARD13Q9Y3M8 1113 aa19.73■□□□□ 0.75
PDE4C-208ENST00000595343 BAHCC1Q9P281 2608 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 A0A1W2PQF6 199 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 SRRM3A6NNA2 597 aaPredicted RBP19.72■□□□□ 0.75
PDE4C-208ENST00000595343 SPTLC2O15270 562 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 SERPINF2P08697 491 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 IRF1P10914 325 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 HOXB2P14652 356 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 CASP4P49662 377 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 ZNF33AQ06730 810 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 EHHADHQ08426 723 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 HDDC3Q8N4P3 179 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 IQUBQ8NA54 791 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 PLEKHO2Q8TD55 490 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 ZCCHC14Q8WYQ9 949 aaKnown RBP19.72■□□□□ 0.75
PDE4C-208ENST00000595343 SMARCD1Q96GM5 515 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 C7orf25Q9BPX7 421 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 NACA2Q9H009 215 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 CAPN10Q9HC96 672 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 MSRB2Q9Y3D2 182 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 CEP192Q8TEP8 1941 aa19.72■□□□□ 0.75
PDE4C-208ENST00000595343 ADAMTS9Q9P2N4 1935 aa19.71■□□□□ 0.75
PDE4C-208ENST00000595343 IGHV1OR15-9A0A0B4J2B8 117 aa19.71■□□□□ 0.75
PDE4C-208ENST00000595343 AP1G2O75843 785 aa19.71■□□□□ 0.75
PDE4C-208ENST00000595343 PGFP49763 221 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms