RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SETSIPP0DME0 302 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 ATF2P15336 505 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 IL1R2P27930 398 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 CTGFP29279 349 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 PSMC4P43686 418 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 RGS7P49802 495 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 PTK6Q13882 451 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 GRAMD1AQ96CP6 724 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 SNF8Q96H20 258 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 ZFYVE28Q9HCC9 887 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 DNAJC17Q9NVM6 304 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 KLHL14Q9P2G3 628 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 LMNAP02545 664 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 PDHA1P08559 390 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 SCN1AP35498 2009 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 MAGEA8P43361 318 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 RANBP1P43487 201 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 DYNLT1P63172 113 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 ZBTB6Q15916 424 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 GOLGA7BQ2TAP0 167 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 TFDP3Q5H9I0 405 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 PPP1R26Q5T8A7 1209 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 INPP5DQ92835 1189 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 FAM136AQ96C01 138 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 LPIN3Q9BQK8 851 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 WHRNQ9P202 907 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 DNPEPQ9ULA0 475 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 TRIM33Q9UPN9 1127 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 DERAQ9Y315 318 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 HTTP42858 3142 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 SMIM23A6NLE4 172 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 E5RJQ4 531 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 RASGRF2O14827 1237 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 MAP3K13O43283 966 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 HCRTO43612 131 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 GRAP2O75791 330 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 IVDP26440 423 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 ITGA8P53708 1063 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 SLC25A11Q02978 314 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 IRF5Q13568 498 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 AUHQ13825 339 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 LCLAT1Q6UWP7 414 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 ALKAL1Q6UXT8 129 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 OR6B3Q8NGW1 331 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 CKAP2Q8WWK9 683 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 SOCS4Q8WXH5 440 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 PIWIL1Q96J94 861 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 FAM192AQ9GZU8 254 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 DDX56Q9NY93 547 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 CNTN3Q9P232 1028 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 SCOCQ9UIL1 159 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 ZMYND8Q9ULU4 1186 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 TRIP12Q14669 1992 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 hCG_1818297A0A087WSY0 165 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 EIF4E1BA6NMX2 242 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 ITIH2P19823 946 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 CHKAP35790 457 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 CDKN2BP42772 138 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 C9orf57Q5W0N0 161 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 OR6B2Q6IFH4 312 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 SYDE1Q6ZW31 735 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 KATNAL1Q9BW62 490 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 GOLGA2P5Q9HBQ8 144 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 PCMTD2Q9NV79 361 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 DLGAP2Q9P1A6 1054 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 ZNF148Q9UQR1 794 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 NME7Q9Y5B8 376 aa17.8■□□□□ 0.44
SHKBP1-205ENST00000594973 SMIM28A0A1B0GU29 152 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 LIASO43766 372 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 GABRB2P47870 512 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 PCBP1Q15365 356 aaKnown RBP eCLIP17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 TTC39CQ8N584 583 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 MCRS1Q96EZ8 462 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 PWWP2AQ96N64 755 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 NUDCD1Q96RS6 583 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 DPEP3Q9H4B8 488 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 DMAP1Q9NPF5 467 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 SAE1Q9UBE0 346 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 ANAPC5Q9UJX4 755 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 LRCH1Q9Y2L9 728 aa17.79■□□□□ 0.44
SHKBP1-205ENST00000594973 PFKMP08237 780 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 SLC10A3P09131 477 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 CD48P09326 243 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 RARGP13631 454 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 AKR1A1P14550 325 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 PLCB3Q01970 1234 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 HADHQ16836 314 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 SOWAHAQ2M3V2 549 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 SH3PXD2AQ5TCZ1 1133 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 SMYD5Q6GMV2 418 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 FAM183BPQ6ZVS7 135 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 EXOC3L1Q86VI1 746 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 GLIS1Q8NBF1 620 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 TRPV1Q8NER1 839 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 FNIP1Q8TF40 1166 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 HSPH1Q92598 858 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms