RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 OTUB2Q96DC9 234 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 DUSP16Q9BY84 665 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 PNPLA8Q9NP80 782 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 CISHQ9NSE2 258 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 ATG2BQ96BY7 2078 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 ADH1CP00326 375 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 RETP07949 1114 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 CBWD6Q4V339 395 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 CBWD3Q5JTY5 395 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 CBWD5Q5RIA9 395 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 TMEM176AQ96HP8 235 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 DHTKD1Q96HY7 919 aaPredicted RBP24.78■■□□□ 1.56
LSM4-204ENST00000594828 ARMCX3Q9UH62 379 aaPredicted RBP24.78■■□□□ 1.56
LSM4-204ENST00000594828 USP18Q9UMW8 372 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 MYH10P35580 1976 aa24.78■■□□□ 1.56
LSM4-204ENST00000594828 ZNF292O60281 2723 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 K7EQS6 105 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 PSMA7O14818 248 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 CYP26A1O43174 497 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 TGM1P22735 817 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 ATP5C1P36542 298 aaKnown RBP24.77■■□□□ 1.56
LSM4-204ENST00000594828 SLC6A11P48066 632 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.77■■□□□ 1.56
LSM4-204ENST00000594828 HHIPQ96QV1 700 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 PNKPQ96T60 521 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 ARID3AQ99856 593 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 FAM124BQ9H5Z6 455 aaPredicted RBP24.77■■□□□ 1.56
LSM4-204ENST00000594828 MAN1B1Q9UKM7 699 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 COQ4Q9Y3A0 265 aa24.77■■□□□ 1.56
LSM4-204ENST00000594828 GPR179Q6PRD1 2367 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 TBX18O95935 607 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 IRF1P10914 325 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 ADH5P11766 374 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 EIF2DP41214 584 aaKnown RBP24.76■■□□□ 1.55
LSM4-204ENST00000594828 PPP1R2P41236 205 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 KIF11P52732 1056 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 RAD23BP54727 409 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 SEC13P55735 322 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 SPEM2Q0P670 501 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 DMC1Q14565 340 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 C2orf27AQ580R0 203 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 LY6G5CQ5SRR4 150 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 ERMP1Q7Z2K6 904 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 SLC4A11Q8NBS3 891 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 USP33Q8TEY7 942 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 GAB3Q8WWW8 586 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 DUSP9Q99956 384 aaKnown RBP24.76■■□□□ 1.55
LSM4-204ENST00000594828 CYLDQ9NQC7 956 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 OSER1Q9NX31 292 aa24.76■■□□□ 1.55
LSM4-204ENST00000594828 RPP40O75818 363 aaKnown RBP24.75■■□□□ 1.55
LSM4-204ENST00000594828 FOXK2Q01167 660 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 GAD2Q05329 585 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 BBS7Q8IWZ6 715 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 FAM160A2Q8N612 972 aaPredicted RBP24.75■■□□□ 1.55
LSM4-204ENST00000594828 WBP2Q969T9 261 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 SLC35C1Q96A29 364 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 KLF16Q9BXK1 252 aaPredicted RBP24.75■■□□□ 1.55
LSM4-204ENST00000594828 NMUR1Q9HB89 426 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 METTL14Q9HCE5 456 aaKnown RBP24.75■■□□□ 1.55
LSM4-204ENST00000594828 PARD6AQ9NPB6 346 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 FRYLO94915 3013 aa24.75■■□□□ 1.55
LSM4-204ENST00000594828 A0A1W2PQH9 124 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 AXIN1O15169 862 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 APODP05090 189 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 CCDC192P0DO97 292 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 RARGP13631 454 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 CD44P16070 742 aaKnown RBP24.74■■□□□ 1.55
LSM4-204ENST00000594828 LMNB2Q03252 620 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 PUM1Q14671 1186 aaKnown RBP eCLIP24.74■■□□□ 1.558e-8■□□□□ 9.6
LSM4-204ENST00000594828 RSPO4Q2I0M5 234 aaPredicted RBP24.74■■□□□ 1.55
LSM4-204ENST00000594828 HTR3DQ70Z44 454 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 C12orf40Q86WS4 652 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 WDR87Q6ZQQ6 2873 aa24.74■■□□□ 1.55
LSM4-204ENST00000594828 PRR5-ARHGAP8B1AHC4 643 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.73■■□□□ 1.55
LSM4-204ENST00000594828 LRP3O75074 770 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 GADD45BO75293 160 aaPredicted RBP24.73■■□□□ 1.55
LSM4-204ENST00000594828 KAT7O95251 611 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 APBB3O95704 486 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 PSEN1P49768 467 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 MRPS21P82921 87 aaKnown RBP24.73■■□□□ 1.55
LSM4-204ENST00000594828 ARHGAP8P85298 464 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 GOLGA8FQ08AF8 430 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 GOLGA8DPQ0D2H9 430 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 CUL2Q13617 745 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 BTBD8Q5XKL5 378 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 ARHGAP17Q68EM7 881 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 CCDC186Q7Z3E2 898 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 CACNA2D4Q7Z3S7 1137 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 CEP63Q96MT8 703 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 ARHGEF4Q9NR80 690 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 SPHK2Q9NRA0 654 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.73■■□□□ 1.55
LSM4-204ENST00000594828 DLL3Q9NYJ7 618 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 NAGPAQ9UK23 515 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 USP3Q9Y6I4 520 aa24.73■■□□□ 1.55
LSM4-204ENST00000594828 A0A0A0MRY4 1105 aa24.72■■□□□ 1.55
LSM4-204ENST00000594828 ANTXRLA6NF34 631 aa24.72■■□□□ 1.55
LSM4-204ENST00000594828 SDHBP21912 280 aa24.72■■□□□ 1.55
LSM4-204ENST00000594828 GRIA2P42262 883 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms