RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 H0Y3Z8 333 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 TRAFD1O14545 582 aaPredicted RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 HNRNPRO43390 633 aaKnown RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 PRKCZQ05513 592 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 PTP4A2Q12974 167 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 SNX30Q5VWJ9 437 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 DUPD1Q68J44 220 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 CGB2Q6NT52 195 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 NOTUMQ6P988 496 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 ZC3H18Q86VM9 953 aaKnown RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 CKAP2Q8WWK9 683 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 SCG3Q8WXD2 468 aaKnown RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 IRGQQ8WZA9 623 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 KIF12Q96FN5 646 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 DDX43Q9NXZ2 648 aaKnown RBP16.05■□□□□ 0.16
PNKP-204ENST00000594661 TRIP11Q15643 1979 aa16.05■□□□□ 0.16
PNKP-204ENST00000594661 TLDC2A0PJX2 215 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 AOC2O75106 756 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 PGK1P00558 417 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 SPATA31D3P0C874 917 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 GJA9P57773 515 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 ORC1Q13415 861 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 LIN9Q5TKA1 542 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 MFSD14CQ5VZR4 134 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 SPATA31D4Q6ZUB0 917 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 GRAMD1AQ96CP6 724 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 ZMAT2Q96NC0 199 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 CENPKQ9BS16 269 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 PLVAPQ9BX97 442 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 TBC1D10AQ9BXI6 508 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 NXF3Q9H4D5 531 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 IL1RAPL1Q9NZN1 696 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 HMGXB4Q9UGU5 601 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 IDO1P14902 403 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 PTGIRP43119 386 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 YWHAEP62258 255 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 TTC27Q6P3X3 843 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 CCDC137Q6PK04 289 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 SLC7A6OSQ96CW6 309 aaPredicted RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 HPDLQ96IR7 371 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 SNX27Q96L92 541 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 TWNKQ96RR1 684 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 MYLK2Q9H1R3 596 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 VRTNQ9H8Y1 702 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 PCYOX1Q9UHG3 505 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 ITGA11Q9UKX5 1188 aa16.04■□□□□ 0.16
PNKP-204ENST00000594661 PAIP2BQ9ULR5 123 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 PIN4Q9Y237 131 aaKnown RBP16.04■□□□□ 0.16
PNKP-204ENST00000594661 ENTPD5O75356 428 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 LYNP07948 512 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 ATICP31939 592 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 NRG4Q8WWG1 115 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 OLFM3Q96PB7 478 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 RNF19AQ9NV58 838 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 SPATA7Q9P0W8 599 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 SNX24Q9Y343 169 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 SLC1A1P43005 524 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
PNKP-204ENST00000594661 MAMLD1Q13495 774 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 AUHQ13825 339 aaKnown RBP16.03■□□□□ 0.16
PNKP-204ENST00000594661 SLC29A2Q14542 456 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 PCBP1Q15365 356 aaKnown RBP eCLIP16.03■□□□□ 0.16
PNKP-204ENST00000594661 MTFR1Q15390 333 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 SPDYAQ5MJ70 313 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 NT5DC4Q86YG4 428 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 WDTC1Q8N5D0 677 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 VCPIP1Q96JH7 1222 aa16.03■□□□□ 0.16
PNKP-204ENST00000594661 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
PNKP-204ENST00000594661 BARX2Q9UMQ3 279 aaPredicted RBP16.03■□□□□ 0.16
PNKP-204ENST00000594661 LSM8O95777 96 aaKnown RBP16.02■□□□□ 0.16
PNKP-204ENST00000594661 ALDH1A1P00352 501 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 CD19P15391 556 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 MMP8P22894 467 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 COILP38432 576 aaPredicted RBP16.02■□□□□ 0.16
PNKP-204ENST00000594661 CDK7P50613 346 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 RBP5P82980 135 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 PLOD1Q02809 727 aaPredicted RBP16.02■□□□□ 0.16
PNKP-204ENST00000594661 AP1B1Q10567 949 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.16
PNKP-204ENST00000594661 CYP1B1Q16678 543 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 GLRA4Q5JXX5 417 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 PLEKHA7Q6IQ23 1121 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 LRRC74BQ6ZQY2 392 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 RINLQ6ZS11 566 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 CCDC105Q8IYK2 499 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms