RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 GRAP2O75791 330 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 MAP3K6O95382 1288 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 TSHRP16473 764 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 SP100P23497 879 aaPredicted RBP17.18■□□□□ 0.34
LIG1-206ENST00000594067 EDNRBP24530 442 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 ETV4P43268 484 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 SARNPP82979 210 aaKnown RBP17.18■□□□□ 0.34
LIG1-206ENST00000594067 ZBTB16Q05516 673 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 KCNJ11Q14654 390 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 RCN1Q15293 331 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 FAXCQ5TGI0 409 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 IRGCQ6NXR0 463 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 APLFQ8IW19 511 aaPredicted RBP17.18■□□□□ 0.34
LIG1-206ENST00000594067 LRRN4Q8WUT4 740 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 TMEM176AQ96HP8 235 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 NSL1Q96IY1 281 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 RAB6BQ9NRW1 208 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 LACTBL1A8MY62 500 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 KRT36O76013 467 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 DHRS4L1P0CG22 281 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 GPD2P43304 727 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 CLCN3P51790 818 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 KPNB1Q14974 876 aaKnown RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 CCDC6Q16204 474 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 TRNP1Q6NT89 227 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 CTAGE3PQ8IX95 158 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 TEKT4Q8WW24 435 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 PIWIL1Q96J94 861 aaKnown RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 HEXIM2Q96MH2 286 aaKnown RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 FZD8Q9H461 694 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 IGKV6-21A0A0C4DH24 114 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 GPR25O00155 361 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 STIP1P31948 543 aaKnown RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 OCRLQ01968 901 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 SLC18A2Q05940 514 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 JADE1Q6IE81 842 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 SLC30A9Q6PML9 568 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 SH2D5Q6ZV89 423 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 CYP4V2Q6ZWL3 525 aaPredicted RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 RXFP2Q8WXD0 754 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 SCG3Q8WXD2 468 aaKnown RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 GPR20Q99678 358 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 TUBB6Q9BUF5 446 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 PIDD1Q9HB75 910 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 PAPOLBQ9NRJ5 636 aaKnown RBP17.17■□□□□ 0.34
LIG1-206ENST00000594067 GPATCH2LQ9NWQ4 482 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 LRCH1Q9Y2L9 728 aa17.17■□□□□ 0.34
LIG1-206ENST00000594067 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
LIG1-206ENST00000594067 GYG2O15488 501 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 TBX10O75333 385 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 CILPO75339 1184 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 IQCF3P0C7M6 154 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 GPD1P21695 349 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 PRKD1Q15139 912 aaPredicted RBP17.16■□□□□ 0.34
LIG1-206ENST00000594067 OR52E8Q6IFG1 317 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 OR6B2Q6IFH4 312 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 CDHR3Q6ZTQ4 885 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 PPM1NQ8N819 430 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.16■□□□□ 0.34
LIG1-206ENST00000594067 WDR60Q8WVS4 1066 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 PPP1R16BQ96T49 567 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 TAS2R1Q9NYW7 299 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 TRIM49D1C9J1S8 452 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 KCNN4O15554 427 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 DNAJC6O75061 913 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 GNAT1P11488 350 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 PDGFRAP16234 1089 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 GABRB2P47870 512 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 PAPOLAP51003 745 aaKnown RBP17.16■□□□□ 0.34
LIG1-206ENST00000594067 ZNF143P52747 638 aaPredicted RBP17.16■□□□□ 0.34
LIG1-206ENST00000594067 CDK16Q00536 496 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 RINLQ6ZS11 566 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 CHSY1Q86X52 802 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 SKA1Q96BD8 255 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 LBHD1Q9BQE6 289 aaPredicted RBP17.16■□□□□ 0.34
LIG1-206ENST00000594067 MAF1Q9H063 256 aa17.16■□□□□ 0.34
LIG1-206ENST00000594067 CAPN9O14815 690 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 SCYL2Q6P3W7 929 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 TTC7BQ86TV6 843 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 TRPM4Q8TD43 1214 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 HEY1Q9Y5J3 304 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 CXorf49A8MYA2 514 aaPredicted RBP17.15■□□□□ 0.34
LIG1-206ENST00000594067 COPEO14579 308 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 ENDOD1O94919 500 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 IL18RAPO95256 599 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 PSMG1O95456 288 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 DLDP09622 509 aaKnown RBP17.15■□□□□ 0.34
LIG1-206ENST00000594067 TGFB3P10600 412 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 SERPINB4P48594 390 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
LIG1-206ENST00000594067 MBTD1Q05BQ5 628 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 SLC34A1Q06495 639 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 KRT81Q14533 505 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 ACAP1Q15027 740 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 RNF220Q5VTB9 566 aa17.15■□□□□ 0.34
LIG1-206ENST00000594067 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
LIG1-206ENST00000594067 EFCAB12Q6NXP0 572 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms