RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 TMC5Q6UXY8 1006 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 ATRIPQ8WXE1 791 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CYFIP2Q96F07 1278 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 SEPT5Q99719 369 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-219ENST00000592927 B3GNT5Q9BYG0 378 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CRISPLD1Q9H336 500 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 SFXN1Q9H9B4 322 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 PARD6AQ9NPB6 346 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-219ENST00000592927 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 IGSF9Q9P2J2 1179 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 NENFQ9UMX5 172 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 INSL5Q9Y5Q6 135 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 CLDN5O00501 218 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX39A-219ENST00000592927 SLC30A4O14863 429 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 RFPL2O75678 378 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 LRG1P02750 347 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 HNRNPA1P09651 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX39A-219ENST00000592927 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-219ENST00000592927 VDRP11473 427 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 GZMAP12544 262 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 CYP2F1P24903 491 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 HOXA9P31269 272 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 GRIK1P39086 918 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 MAGEA11P43364 429 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 PLD1Q13393 1074 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF528Q3MIS6 628 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 VSTM1Q6UX27 236 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 TRIM72Q6ZMU5 477 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 SLC47A2Q86VL8 602 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 TTC9BQ8N6N2 239 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 HNRNPABQ99729 332 aaKnown RBP12.54□□□□□ -0.4
DDX39A-219ENST00000592927 RHOBTB2Q9BYZ6 727 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF518BQ9C0D4 1074 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 NOCTQ9UK39 431 aaKnown RBP12.54□□□□□ -0.4
DDX39A-219ENST00000592927 SMG5Q9UPR3 1016 aaKnown RBP12.54□□□□□ -0.4
DDX39A-219ENST00000592927 YIPF1Q9Y548 306 aa12.54□□□□□ -0.4
DDX39A-219ENST00000592927 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 SOBPA7XYQ1 873 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 KIF5CO60282 957 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 XYLBO75191 536 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 AP1G2O75843 785 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 SOAT2O75908 522 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 FAM200BP0CF97 657 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 TNNT1P13805 278 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 ADORA2BP29275 332 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 GNA15P30679 374 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 EPHB3P54753 998 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 RPL10AP62906 217 aaKnown RBP12.53□□□□□ -0.4
DDX39A-219ENST00000592927 TWF1Q12792 350 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-219ENST00000592927 ARHGAP17Q68EM7 881 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 NOP9Q86U38 636 aaKnown RBP12.53□□□□□ -0.4
DDX39A-219ENST00000592927 FAM35AQ86V20 835 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 ELMOD1Q8N336 334 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 CMASQ8NFW8 434 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-219ENST00000592927 OLIG1Q8TAK6 271 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 DDX1Q92499 740 aaKnown RBP12.53□□□□□ -0.4
DDX39A-219ENST00000592927 SMARCD1Q96GM5 515 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 C16orf45Q96MC5 204 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-219ENST00000592927 LZTFL1Q9NQ48 299 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
DDX39A-219ENST00000592927 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.4
DDX39A-219ENST00000592927 ASPMQ8IZT6 3477 aa12.52□□□□□ -0.4
DDX39A-219ENST00000592927 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 TRIM66O15016 1216 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 CCL16O15467 120 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 MED7O43513 233 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 RTN2O75298 545 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 CALCAP01258 141 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 PROS1P07225 676 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 H2AFZP0C0S5 128 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 CHRNB2P17787 502 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 PMLP29590 882 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 SLC8A3P57103 927 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 FMO1Q01740 532 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 CSTF1Q05048 431 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 VEPH1Q14D04 833 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 STILQ15468 1287 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 CNGA2Q16280 664 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 TAF12Q16514 161 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 DDR2Q16832 855 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 GOLGA7BQ2TAP0 167 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms