RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 BLOC1S4Q9NUP1 217 aa10.79□□□□□ -0.68
SMCO4P1-201ENST00000592909 SIX4Q9UIU6 781 aa10.79□□□□□ -0.68
SMCO4P1-201ENST00000592909 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
SMCO4P1-201ENST00000592909 ANAPC1Q9H1A4 1944 aa10.79□□□□□ -0.68
SMCO4P1-201ENST00000592909 KNTC1P50748 2209 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 GOLGA4Q13439 2230 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 VWA3AA6NCI4 1184 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 F8VP50 259 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 GFRA2O00451 464 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 TRIM24O15164 1050 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 FLRT2O43155 660 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 CILPO75339 1184 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 TBCAO75347 108 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 PPP1R37O75864 691 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 KRT18P05783 430 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 KRT19P08727 400 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 PLA2G2AP14555 144 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 CD6P30203 668 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 MATKP42679 507 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 PSMC1P62191 440 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 BNC1Q01954 994 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 CYP27A1Q02318 531 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 DHX8Q14562 1220 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 SMAD1Q15797 465 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 RILPL1Q5EBL4 403 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 TMEM25Q86YD3 366 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 MARCH9Q86YJ5 346 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 MYCBPAPQ8TBZ2 947 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 OVCA2Q8WZ82 227 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 PCED1BQ96HM7 432 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 AK8Q96MA6 479 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 FAM213AQ9BRX8 229 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 STRA6Q9BX79 667 aa10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 WSB2Q9NYS7 404 aaPredicted RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 FNDC3AQ9Y2H6 1198 aaKnown RBP10.78□□□□□ -0.68
SMCO4P1-201ENST00000592909 NAV2Q8IVL1 2488 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 ZNF462Q96JM2 2506 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 MEI4A8MW99 385 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 BCAT2O15382 392 aaPredicted RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 COCHO43405 550 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 LDHAP00338 332 aaKnown RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 NCAM1P13591 858 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 WARSP23381 471 aaKnown RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 YWHAQP27348 245 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 MYO1EQ12965 1108 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 MCM6Q14566 821 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 SUZ12Q15022 739 aaKnown RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 HLA-BQ31612 363 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 ANO4Q32M45 955 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 HECTD3Q5T447 861 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 SNX30Q5VWJ9 437 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 GRAMD4Q6IC98 578 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 ZNF605Q86T29 641 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 BBS7Q8IWZ6 715 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 ZCCHC9Q8N567 271 aaKnown RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 PDZD8Q8NEN9 1154 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 RAD54LQ92698 747 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 CALML4Q96GE6 196 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 TOE1Q96GM8 510 aaKnown RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 SLC6A17Q9H1V8 727 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 PRORYQ9H606 182 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 PRDM16Q9HAZ2 1276 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 ITM2CQ9NQX7 267 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 RBAKQ9NYW8 714 aaPredicted RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 USP36Q9P275 1121 aaKnown RBP10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 SH3BP1Q9Y3L3 701 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 RAI2Q9Y5P3 530 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 RAD54BQ9Y620 910 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 MYH11P35749 1972 aa10.77□□□□□ -0.69
SMCO4P1-201ENST00000592909 METTL12A8MUP2 240 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 PRRT4C9JH25 899 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 TNFSF14O43557 240 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 CACNG3O60359 315 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 PDGFRBP09619 1106 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 FAM163BP0C2L3 166 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 GARTP22102 1010 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 UBA7P41226 1012 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 TUBP50607 506 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 PTPRNQ16849 979 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 DCAF12L1Q5VU92 463 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 KIAA1324Q6UXG2 1013 aaKnown RBP10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 NUP93Q8N1F7 819 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 ZSWIM2Q8NEG5 633 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 C1orf216Q8TAB5 229 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 PIP4K2CQ8TBX8 421 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 SCFD1Q8WVM8 642 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 SAAL1Q96ER3 474 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 HPDLQ96IR7 371 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 FAM84AQ96KN4 292 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 XPO6Q96QU8 1125 aaKnown RBP10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 MTMR12Q9C0I1 747 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 MIR1-1HGQ9H1L0 117 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 TMEM30AQ9NV96 361 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 DNAJC17Q9NVM6 304 aaKnown RBP10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 EXOC7Q9UPT5 735 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 KNL1Q8NG31 2342 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 MYOFQ9NZM1 2061 aa10.76□□□□□ -0.69
SMCO4P1-201ENST00000592909 CABIN1Q9Y6J0 2220 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms