RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NPTX2P47972 431 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 FPGSQ05932 587 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 CYP2A13Q16696 494 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 FAM110CQ1W6H9 321 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 TRIM60Q495X7 471 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 RBM20Q5T481 1227 aaKnown RBP7.24□□□□□ -1.25
VMP1-215ENST00000592619 SP5Q6BEB4 398 aaPredicted RBP7.24□□□□□ -1.25
VMP1-215ENST00000592619 RGS7BPQ6MZT1 257 aaPredicted RBP7.24□□□□□ -1.25
VMP1-215ENST00000592619 SCAMP5Q8TAC9 235 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 SNX19Q92543 992 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 GRAMD1AQ96CP6 724 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 PYM1Q9BRP8 204 aaKnown RBP7.24□□□□□ -1.25
VMP1-215ENST00000592619 TMEM74BQ9NUR3 256 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 TRPM5Q9NZQ8 1165 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 SSX2IPQ9Y2D8 614 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 EYA2O00167 538 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 ZNF623O75123 536 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 ZFPL1O95159 310 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 CKMT1AP12532 417 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 GYS1P13807 737 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 BMP7P18075 431 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 UQCRC1P31930 480 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 PDE6CP51160 858 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 CXADRP78310 365 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 TIAL1Q01085 375 aaKnown RBP eCLIP7.23□□□□□ -1.254e-22■■■■■ 37
VMP1-215ENST00000592619 SCAPQ12770 1279 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 TUBB3Q13509 450 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 SLC4A8Q2Y0W8 1093 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 CD300EQ496F6 205 aaPredicted RBP7.23□□□□□ -1.25
VMP1-215ENST00000592619 PREPLQ4J6C6 727 aaPredicted RBP7.23□□□□□ -1.25
VMP1-215ENST00000592619 UBXN11Q5T124 520 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 ANKRD45Q5TZF3 282 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 ARMC6Q6NXE6 501 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 LRRTM4Q86VH4 590 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 SIAH1Q8IUQ4 282 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 TEX101Q9BY14 249 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 TWSG1Q9GZX9 223 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 SORCS3Q9UPU3 1222 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 JAG2Q9Y219 1238 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 CRYL1Q9Y2S2 319 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
VMP1-215ENST00000592619 COL15A1P39059 1388 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 OTOL1A6NHN0 477 aaPredicted RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 HMX3A6NHT5 357 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 DBX1A6NMT0 343 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 ADM5C9JUS6 153 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 J3KRW8 73 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 EPB41L2O43491 1005 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 ZNF500O60304 480 aaPredicted RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 HGFP14210 728 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 EPHA3P29320 983 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 GATMP50440 423 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 PAPOLAP51003 745 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 PGDP52209 483 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 DDX10Q13206 875 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 FHL3Q13643 280 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 RRP1BQ14684 758 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 HS1BP3Q53T59 392 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 VPS53Q5VIR6 699 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 RAB11FIP2Q7L804 512 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 SIMC1Q8NDZ2 872 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 PPHLN1Q8NEY8 458 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 OR6Y1Q8NGX8 325 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 WDR60Q8WVS4 1066 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 HERVK_113Q902F9 699 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 NACC2Q96BF6 587 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 HIST1H2AAQ96QV6 131 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 WDR24Q96S15 920 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 INO80BQ9C086 356 aaPredicted RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 AMBRA1Q9C0C7 1298 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 EPS8L2Q9H6S3 715 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 RIC8AQ9NPQ8 531 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 FEM1BQ9UK73 627 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 SLC13A4Q9UKG4 626 aa7.22□□□□□ -1.25
VMP1-215ENST00000592619 PPRC1Q5VV67 1664 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
VMP1-215ENST00000592619 RNASET2O00584 256 aaKnown RBP7.21□□□□□ -1.26
VMP1-215ENST00000592619 CLGNO14967 610 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 ZSCAN9O15535 394 aaPredicted RBP7.21□□□□□ -1.26
VMP1-215ENST00000592619 SNX2O60749 519 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 SIM2Q14190 667 aaPredicted RBP7.21□□□□□ -1.26
VMP1-215ENST00000592619 SPDYE7PQ495Y7 208 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 NFRKBQ6P4R8 1299 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 C2CD5Q86YS7 1000 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 ABRAQ8N0Z2 381 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 ASB12Q8WXK4 309 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 RILPL2Q969X0 211 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 FAM136AQ96C01 138 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 GALNT9Q9HCQ5 603 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 SEPSECSQ9HD40 501 aaKnown RBP7.21□□□□□ -1.26
VMP1-215ENST00000592619 WASH6PQ9NQA3 447 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 SERTAD3Q9UJW9 196 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 DAPP1Q9UN19 280 aa7.21□□□□□ -1.26
VMP1-215ENST00000592619 VPS8Q8N3P4 1428 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TEX14Q8IWB6 1497 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 PNMA6EA0A0J9YXQ4 647 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 J3KTA2 159 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 PRICKLE3O43900 615 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms