RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 NUP93Q8N1F7 819 aa20.86■□□□□ 0.93
PRKCSH-216ENST00000592445 TERB1Q8NA31 727 aa20.86■□□□□ 0.93
PRKCSH-216ENST00000592445 FBXO32Q969P5 355 aa20.86■□□□□ 0.93
PRKCSH-216ENST00000592445 ERLEC1Q96DZ1 483 aa20.86■□□□□ 0.93
PRKCSH-216ENST00000592445 ZNF518BQ9C0D4 1074 aa20.86■□□□□ 0.93
PRKCSH-216ENST00000592445 A0A1W2PQF6 199 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 NDUFS2O75306 463 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 TXLNAP40222 546 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 HECTD3Q5T447 861 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 SYCP2LQ5T4T6 812 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 LARP1BQ659C4 914 aaKnown RBP20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 BRAPQ7Z569 592 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 PDZD3Q86UT5 571 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 CBWD2Q8IUF1 395 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 BBS7Q8IWZ6 715 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 CHPFQ8IZ52 775 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 FGFBP2Q9BYJ0 223 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 FAM124BQ9H5Z6 455 aaPredicted RBP20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 CCDC86Q9H6F5 360 aaKnown RBP20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 SPHK2Q9NRA0 654 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 CHORDC1Q9UHD1 332 aaPredicted RBP20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 SMC3Q9UQE7 1217 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 PCDH15Q96QU1 1955 aa20.85■□□□□ 0.93
PRKCSH-216ENST00000592445 CEP192Q8TEP8 1941 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 RTN3O95197 1032 aaPredicted RBP20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 FTH1P19P0C7X4 201 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 GNSP15586 552 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 NDUFV2P19404 249 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 TNNC1P63316 161 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 GRAMD4Q6IC98 578 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 TMEM25Q86YD3 366 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 MIB1Q86YT6 1006 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 WDR49Q8IV35 697 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 NAXDQ8IW45 347 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 PNPLA1Q8N8W4 532 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 IPO4Q8TEX9 1081 aaKnown RBP20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 ADAMTS14Q8WXS8 1223 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 OVCA2Q8WZ82 227 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 TMX3Q96JJ7 454 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 ZFRQ96KR1 1074 aaKnown RBP20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 NACA2Q9H009 215 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 DPEP3Q9H4B8 488 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 TMEM30AQ9NV96 361 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 PANK4Q9NVE7 773 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 SUSD2Q9UGT4 822 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 STARD13Q9Y3M8 1113 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 NME7Q9Y5B8 376 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 LOC400499M0QZD8 3231 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 ADAMTS20P59510 1910 aa20.84■□□□□ 0.93
PRKCSH-216ENST00000592445 MYO18AQ92614 2054 aaKnown RBP20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 CLDN5O00501 218 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 TRIM24O15164 1050 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 TACC1O75410 805 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 IRF1P10914 325 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 COL28A1Q2UY09 1125 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 SOWAHCQ53LP3 525 aaPredicted RBP20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 EGFLAMQ63HQ2 1017 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 TRAPPC11Q7Z392 1133 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 ACOX2Q99424 681 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 B3GNT5Q9BYG0 378 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 CCSER2Q9H7U1 834 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 DNAJC17Q9NVM6 304 aaKnown RBP20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 HCN2Q9UL51 889 aa20.83■□□□□ 0.93
PRKCSH-216ENST00000592445 A8MXQ7 604 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 DLATP10515 647 aaKnown RBP20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 TNNI1P19237 187 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 RABEP1Q15276 862 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 WDR72Q3MJ13 1102 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 WDR45BQ5MNZ6 344 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 CCNI2Q6ZMN8 369 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 STXBP4Q6ZWJ1 553 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 B3GALNT2Q8NCR0 500 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 SCFD1Q8WVM8 642 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 ZNF419Q96HQ0 510 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 HSPBP1Q9NZL4 362 aa20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 APOBEC2Q9Y235 224 aaKnown RBP20.82■□□□□ 0.92
PRKCSH-216ENST00000592445 FRMD3A2A2Y4 597 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 GJB3O75712 270 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 CST3P01034 146 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 FAM163BP0C2L3 166 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 CCDC73Q6ZRK6 1079 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 SCAMP5Q8TAC9 235 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 FOXJ1Q92949 421 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 XPO6Q96QU8 1125 aaKnown RBP20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 KCNK16Q96T55 309 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 KIAA1586Q9HCI6 787 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 RAD54BQ9Y620 910 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 CLIC4Q9Y696 253 aa20.81■□□□□ 0.92
PRKCSH-216ENST00000592445 ATP8B3O60423 1300 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 NEDD8-MDP1E9PL57 170 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 MAOBP27338 520 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 STAT6P42226 847 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 TUBP50607 506 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 GRIK2Q13002 908 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 KIAA1324Q6UXG2 1013 aaKnown RBP20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 RDH13Q8NBN7 331 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 WBP2Q969T9 261 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 CLIC6Q96NY7 704 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 GABRG3Q99928 467 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms