RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 SKOR2Q2VWA4 1001 aaPredicted RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 TPGS2Q68CL5 300 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 SYT9Q86SS6 491 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 ZNF589Q86UQ0 364 aaPredicted RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 RHPN2Q8IUC4 686 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 CMTM8Q8IZV2 173 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 STAG2Q8N3U4 1231 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 KBTBD3Q8NAB2 608 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 GLIS1Q8NBF1 620 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 TTC16Q8NEE8 873 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 CPT1CQ8TCG5 803 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 APPBP2Q92624 585 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 ATP2A3Q93084 1043 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 TOE1Q96GM8 510 aaKnown RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 NLRP4Q96MN2 994 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 LSG1Q9H089 658 aaKnown RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 ZNF358Q9NW07 568 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 DUS2Q9NX74 493 aaKnown RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 WSB2Q9NYS7 404 aaPredicted RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 YIPF1Q9Y548 306 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 GPC6Q9Y625 555 aaPredicted RBP5.42□□□□□ -1.54
ERCC1-216ENST00000592444 TCHHQ07283 1943 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 NBEAL2Q6ZNJ1 2754 aa5.42□□□□□ -1.54
ERCC1-216ENST00000592444 ANK1P16157 1881 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ADARB2-AS1A8MUL3 147 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 MEIS2O14770 477 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 DYRK3O43781 588 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 DFNA5O60443 496 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 SIN3BO75182 1162 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 SIX3O95343 332 aaPredicted RBP5.41□□□□□ -1.54
ERCC1-216ENST00000592444 FGRP09769 529 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 THEGLP0DJG4 465 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 HOXB2P14652 356 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 CD1EP15812 388 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ACP1P24666 158 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 AVPR1AP37288 418 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 WASP42768 502 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 SLC6A11P48066 632 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 IFNAR2P48551 515 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 EPHB3P54753 998 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 EPHA4P54764 986 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 LTBQ06643 244 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 NKAPLQ5M9Q1 402 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 MIS18BP1Q6P0N0 1132 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 GDF7Q7Z4P5 450 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 DNAJB7Q7Z6W7 309 aaPredicted RBP5.41□□□□□ -1.54
ERCC1-216ENST00000592444 CLEC14AQ86T13 490 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 VASH2Q86V25 355 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ZNF410Q86VK4 478 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 TP53INP2Q8IXH6 220 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 EFCAB13Q8IY85 973 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ARL14Q8N4G2 192 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 CADM4Q8NFZ8 388 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 SAP25Q8TEE9 199 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 OSCP1Q8WVF1 389 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 SNX19Q92543 992 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 FAM227BQ96M60 508 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 HEXIM2Q96MH2 286 aaKnown RBP5.41□□□□□ -1.54
ERCC1-216ENST00000592444 NACC1Q96RE7 527 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 PIGSQ96S52 555 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ZKSCAN3Q9BRR0 538 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 NXF3Q9H4D5 531 aaKnown RBP5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ALG2Q9H553 416 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 PTPRHQ9HD43 1115 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 ANO2Q9NQ90 1003 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 TPSG1Q9NRR2 321 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 TDP1Q9NUW8 608 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 PARP2Q9UGN5 583 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 AFF4Q9UHB7 1163 aaKnown RBP5.41□□□□□ -1.54
ERCC1-216ENST00000592444 STARD13Q9Y3M8 1113 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 MAFBQ9Y5Q3 323 aaPredicted RBP5.41□□□□□ -1.54
ERCC1-216ENST00000592444 TAF6LQ9Y6J9 622 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 TGP01266 2768 aa5.41□□□□□ -1.54
ERCC1-216ENST00000592444 MYO18AQ92614 2054 aaKnown RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 A0A1W2PQF6 199 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 PRR19A6NJB7 356 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 BTBD18B2RXH4 712 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 OPA1O60313 960 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 TNFSF15O95150 251 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 KAT7O95251 611 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 FGF19O95750 216 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 WNT1P04628 370 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 CSTF2P33240 577 aaKnown RBP eCLIP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 BRCC3P46736 316 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 GRIA4P48058 902 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 TRAF1Q13077 416 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 MRPL49Q13405 166 aaKnown RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 NCOA4Q13772 614 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 MTF1Q14872 753 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 SHBQ15464 509 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 GAB4Q2WGN9 574 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 FOXD4L6Q3SYB3 417 aaPredicted RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 MANEAQ5SRI9 462 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 EGFLAMQ63HQ2 1017 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 KIAA1324Q6UXG2 1013 aaKnown RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 FOXD4L3Q6VB84 417 aaPredicted RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 XYLT1Q86Y38 959 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 SLC9A9Q8IVB4 645 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 MAB21L3Q8N8X9 362 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms