RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 PURAQ00577 322 aaKnown RBP16.43■□□□□ 0.22
MBD1-227ENST00000592060 NR1H3Q13133 447 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 SV2CQ496J9 727 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 ANKRD20A8PQ5CZ79 823 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 EFHC2Q5JST6 749 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 DARS2Q6PI48 645 aaKnown RBP16.43■□□□□ 0.22
MBD1-227ENST00000592060 NME8Q8N427 588 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 ANKRD42Q8N9B4 389 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 PCDH19Q8TAB3 1148 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 CKAP2Q8WWK9 683 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 CENPIQ92674 756 aaPredicted RBP16.43■□□□□ 0.22
MBD1-227ENST00000592060 RTP4Q96DX8 246 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 CABS1Q96KC9 395 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 ZNF670Q9BS34 389 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 SNX25Q9H3E2 840 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 USP29Q9HBJ7 922 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 KCNK9Q9NPC2 374 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 RASA4BC9J798 803 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 RASA4O43374 803 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 FSBPO95073 299 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 KCNJ11Q14654 390 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 C1orf228Q6PIY5 440 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 ZC3H18Q86VM9 953 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 FAM228AQ86W67 206 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 C7orf31Q8N865 590 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 CCDC197Q8NCU1 140 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 APPL2Q8NEU8 664 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 OSBPL7Q9BZF2 842 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 SLC24A2Q9UI40 661 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 XPO7Q9UIA9 1087 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 POC1B-GALNT4F8VUJ3 575 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 APOL1O14791 398 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 VIMP08670 466 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 WARSP23381 471 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 TKTP29401 623 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 LRPAP1P30533 357 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 CAPN12Q6ZSI9 719 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 ADGRF2Q8IZF7 708 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 TAB3Q8N5C8 712 aaPredicted RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 ATP11CQ8NB49 1132 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 DYDC1Q8WWB3 177 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 NSRP1Q9H0G5 558 aaKnown RBP16.42■□□□□ 0.22
MBD1-227ENST00000592060 FETUBQ9UGM5 382 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 RABGEF1Q9UJ41 708 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 SCN10AQ9Y5Y9 1956 aa16.42■□□□□ 0.22
MBD1-227ENST00000592060 H7C0C1 242 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 PTGESO14684 152 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 TSHRP16473 764 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 DESP17661 470 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 ACADSBP45954 432 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 ATP5OP48047 213 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 BASP1P80723 227 aaKnown RBP16.41■□□□□ 0.22
MBD1-227ENST00000592060 RNASELQ05823 741 aaKnown RBP16.41■□□□□ 0.22
MBD1-227ENST00000592060 CBLBQ13191 982 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 ITIH4Q14624 930 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 DPYSL2Q16555 572 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 TOP6BLQ8N6T0 577 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 SLC2A14Q8TDB8 520 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 SOCS4Q8WXH5 440 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 HSFY1Q96LI6 401 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 DHRS4Q9BTZ2 278 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 MLXIPLQ9NP71 852 aa16.41■□□□□ 0.22
MBD1-227ENST00000592060 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 MYADML2A6NDP7 307 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 CAPN15O75808 1086 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 GNAT1P11488 350 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 LCP1P13796 627 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 ZNF157P51786 506 aaPredicted RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 LILRA4P59901 499 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 SPRED3Q2MJR0 410 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 CCDC121Q6ZUS5 278 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 FBXO36Q8NEA4 188 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 PYROXD1Q8WU10 500 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 PPP1R10Q96QC0 940 aaKnown RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 PSMC3IPQ9P2W1 217 aaPredicted RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 TSC2P49815 1807 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 BCLAF3A2AJT9 711 aaKnown RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 TCP11X1B4DZS4 312 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 XPO1O14980 1071 aaKnown RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 CHADO15335 359 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 PRPF4O43172 522 aaKnown RBP eCLIP16.4■□□□□ 0.22
MBD1-227ENST00000592060 SSTR1P30872 391 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 L1CAMP32004 1257 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 PHBP35232 272 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 ATXN1P54253 815 aaKnown RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 BCAR1P56945 870 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 EFTUD2Q15029 972 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■■■ 42
MBD1-227ENST00000592060 PPP1R21Q6ZMI0 780 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 ARHGEF18Q6ZSZ5 1173 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 MICALL1Q8N3F8 863 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 B3GALNT2Q8NCR0 500 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 TRPV1Q8NER1 839 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 CCT6BQ92526 530 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms