RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 CPA6Q8N4T0 437 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 MYRIPQ8NFW9 859 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 OSCP1Q8WVF1 389 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 NUP58Q9BVL2 599 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 TTLL2Q9BWV7 592 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 VPS16Q9H269 839 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 FBRSL1Q9HCM7 1045 aaKnown RBP18.46■□□□□ 0.55
CIRBP-235ENST00000591935 DUS2Q9NX74 493 aaKnown RBP18.46■□□□□ 0.55
CIRBP-235ENST00000591935 TAB2Q9NYJ8 693 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 TRAF3IP3Q9Y228 551 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 FRMD4BQ9Y2L6 1034 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ATP8B3O60423 1300 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 MYOFQ9NZM1 2061 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 TRDMT1O14717 391 aaKnown RBP18.45■□□□□ 0.54
CIRBP-235ENST00000591935 CLSTN1O94985 981 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 HOXA6P31267 233 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 IFNAR2P48551 515 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 DMWDQ09019 674 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 NR1H3Q13133 447 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 SGSM1Q2NKQ1 1148 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 TMEM196Q5HYL7 178 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 NAIF1Q69YI7 327 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-235ENST00000591935 FSTL4Q6MZW2 842 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 SCARA5Q6ZMJ2 495 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 PAQR9Q6ZVX9 377 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 SV2AQ7L0J3 742 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 ERMP1Q7Z2K6 904 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 KIAA1958Q8N8K9 716 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 B3GALNT2Q8NCR0 500 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 TMC2Q8TDI7 906 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 ATP2A3Q93084 1043 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 TNIP3Q96KP6 325 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 GMEB2Q9UKD1 530 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 ARHGAP26Q9UNA1 814 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 WNT6Q9Y6F9 365 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 DCHS1Q96JQ0 3298 aa18.45■□□□□ 0.54
CIRBP-235ENST00000591935 MYO16Q9Y6X6 1858 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 DRD1P21728 446 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 UBXN1Q04323 297 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 USP4Q13107 963 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 SPOPLQ6IQ16 392 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 PKN3Q6P5Z2 889 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 LONP2Q86WA8 852 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 SH3RF2Q8TEC5 729 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 TAF4BQ92750 862 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 SLITRK1Q96PX8 696 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 KCNK16Q96T55 309 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 TUBGCP2Q9BSJ2 902 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 RNF38Q9H0F5 515 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 LINC00597Q9H2U6 94 aa18.44■□□□□ 0.54
CIRBP-235ENST00000591935 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■■■■ 49.8
CIRBP-235ENST00000591935 ZNF840PA6NDX5 716 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 K7ESF4 209 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 MAPK13O15264 365 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 MFAP3LO75121 409 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 AKAP3O75969 853 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 RTN3O95197 1032 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-235ENST00000591935 GNA14O95837 355 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 TRIM21P19474 475 aaKnown RBP18.43■□□□□ 0.54
CIRBP-235ENST00000591935 GALK1P51570 392 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 VAMP7P51809 220 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 IFRD2Q12894 506 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-235ENST00000591935 TAF10Q12962 218 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 ORC1Q13415 861 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 FBXO43Q4G163 708 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 ACOT1Q86TX2 421 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 PDZD8Q8NEN9 1154 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 CCDC26Q8TAB7 109 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 PPP1R13BQ96KQ4 1090 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 CNOT6LQ96LI5 555 aaKnown RBP18.43■□□□□ 0.54
CIRBP-235ENST00000591935 CEP63Q96MT8 703 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 ECT2Q9H8V3 914 aa18.43■□□□□ 0.54
CIRBP-235ENST00000591935 USP27XA6NNY8 438 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 CHURC1-FNTBB4DL54 471 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 ABL1P00519 1130 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 HLA-DRAP01903 254 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 SDHBP21912 280 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 NR2F2P24468 414 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 RPL13P26373 211 aaKnown RBP18.42■□□□□ 0.54
CIRBP-235ENST00000591935 GJA4P35212 333 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 FNTBP49356 437 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 ADKP55263 362 aaKnown RBP18.42■□□□□ 0.54
CIRBP-235ENST00000591935 PPP3CAQ08209 521 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 NFIL3Q16649 462 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 EML3Q32P44 896 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 FIGNQ5HY92 759 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 LAIR1Q6GTX8 287 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 TMTC1Q8IUR5 882 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 NUP93Q8N1F7 819 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 OVCA2Q8WZ82 227 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 C16orf45Q96MC5 204 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-235ENST00000591935 P2RY13Q9BPV8 354 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 HMGXB4Q9UGU5 601 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 CEP250Q9BV73 2442 aa18.42■□□□□ 0.54
CIRBP-235ENST00000591935 HRO43593 1189 aa18.41■□□□□ 0.54
CIRBP-235ENST00000591935 NFATC1O95644 943 aa18.41■□□□□ 0.54
CIRBP-235ENST00000591935 ASS1P00966 412 aaKnown RBP18.41■□□□□ 0.54
CIRBP-235ENST00000591935 EGFP01133 1207 aa18.41■□□□□ 0.54
CIRBP-235ENST00000591935 TRIM49P0CI25 452 aa18.41■□□□□ 0.54
CIRBP-235ENST00000591935 TRIM49CP0CI26 452 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms