RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 YWHAQP27348 245 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 C19orf48Q6RUI8 117 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 TRMT11Q7Z4G4 463 aaKnown RBP16.91■□□□□ 0.3
DDX39A-216ENST00000591275 RAB44Q7Z6P3 723 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-216ENST00000591275 TMEM25Q86YD3 366 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 BBS7Q8IWZ6 715 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 TERB1Q8NA31 727 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 HPS3Q969F9 1004 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 WBP2Q969T9 261 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 HSPA12BQ96MM6 686 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 B3GNT5Q9BYG0 378 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 ELOVL4Q9GZR5 314 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 CHORDC1Q9UHD1 332 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-216ENST00000591275 CYP8B1Q9UNU6 501 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 SH3BP1Q9Y3L3 701 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 ADAMTS20P59510 1910 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 CELSR3Q9NYQ7 3312 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 FRMD3A2A2Y4 597 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 FAM221BA6H8Z2 402 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 HOXC11O43248 304 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-216ENST00000591275 DLATP10515 647 aaKnown RBP16.9■□□□□ 0.3
DDX39A-216ENST00000591275 NTSR1P30989 418 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 TXLNAP40222 546 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 SURF1Q15526 300 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 ZNF423Q2M1K9 1284 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 EGFLAMQ63HQ2 1017 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 RABEPKQ7Z6M1 372 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 PROSER1Q86XN7 944 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 NUP93Q8N1F7 819 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 RDH13Q8NBN7 331 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 SCAMP5Q8TAC9 235 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 OTUB2Q96DC9 234 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 KCNK16Q96T55 309 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 ACOX2Q99424 681 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 CCSER2Q9H7U1 834 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 CD93Q9NPY3 652 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 HSPBP1Q9NZL4 362 aa16.9■□□□□ 0.3
DDX39A-216ENST00000591275 A0A1W2PQF6 199 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 KIAA0391O15091 583 aaKnown RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 SH3BP5O60239 455 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 TACC1O75410 805 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 CAPNS1P04632 268 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 NDUFV2P19404 249 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 STAT6P42226 847 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 TNNC1P63316 161 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 CEBPZQ03701 1054 aaKnown RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 SCAPQ12770 1279 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 TRIP6Q15654 476 aaKnown RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 WDR72Q3MJ13 1102 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 HECTD3Q5T447 861 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 PNPLA1Q8N8W4 532 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 KCNV2Q8TDN2 545 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 SLC6A17Q9H1V8 727 aa16.89■□□□□ 0.29
DDX39A-216ENST00000591275 DNAAF2Q9NVR5 837 aaKnown RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 SRPRBQ9Y5M8 271 aaKnown RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 SETXQ7Z333 2677 aaKnown RBP16.89■□□□□ 0.29
DDX39A-216ENST00000591275 A0A087X0B3 334 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 A8MXQ7 604 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-216ENST00000591275 SYPP08247 313 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 TNNI1P19237 187 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 PLEKHG6Q3KR16 790 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 C8orf34Q49A92 452 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 PREPLQ4J6C6 727 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-216ENST00000591275 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 NUDT18Q6ZVK8 323 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 CHPFQ8IZ52 775 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 RGL4Q8IZJ4 473 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 B3GALNT2Q8NCR0 500 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
DDX39A-216ENST00000591275 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 CCDC127Q96BQ5 260 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 DNAJC17Q9NVM6 304 aaKnown RBP16.88■□□□□ 0.29
DDX39A-216ENST00000591275 GMIPQ9P107 970 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 NXF1Q9UBU9 619 aaKnown RBP16.88■□□□□ 0.29
DDX39A-216ENST00000591275 GPSM3Q9Y4H4 160 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 PCDHB9Q9Y5E1 797 aa16.88■□□□□ 0.29
DDX39A-216ENST00000591275 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 ZBTB24O43167 697 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-216ENST00000591275 ZNF217O75362 1048 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 FTH1P19P0C7X4 201 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 MAOBP27338 520 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 HOXD13P35453 343 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 SLC5A3P53794 718 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 HNRNPDQ14103 355 aaKnown RBP16.87■□□□□ 0.29
DDX39A-216ENST00000591275 SNRNP35Q16560 246 aaKnown RBP16.87■□□□□ 0.29
DDX39A-216ENST00000591275 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 FAM173BQ6P4H8 233 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 NACA2Q9H009 215 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 CD248Q9HCU0 757 aa16.87■□□□□ 0.29
DDX39A-216ENST00000591275 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms