RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 GABBR2O75899 941 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 GJA4P35212 333 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 MAGEA9P43362 315 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 MTAPQ13126 283 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 MIIPQ5JXC2 388 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 C1orf228Q6PIY5 440 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 TRIM65Q6PJ69 517 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 GBP6Q6ZN66 633 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 ADGRG2Q8IZP9 1017 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 CHRDQ9H2X0 955 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.54■■□□□ 1.36
MBD3-208ENST00000590830 NUDT5Q9UKK9 219 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 PATJQ8NI35 1801 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 DMDP11532 3685 aa23.54■■□□□ 1.36
MBD3-208ENST00000590830 XPO1O14980 1071 aaKnown RBP23.53■■□□□ 1.36
MBD3-208ENST00000590830 RARGP13631 454 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 BRD2P25440 801 aaKnown RBP23.53■■□□□ 1.36
MBD3-208ENST00000590830 PON1P27169 355 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 CNGA2Q16280 664 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 MAN2A1Q16706 1144 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 DPY19L2P1Q6NXN4 242 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 KIAA1958Q8N8K9 716 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 NDRG1Q92597 394 aaKnown RBP23.53■■□□□ 1.36
MBD3-208ENST00000590830 ATP2A3Q93084 1043 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 KLF16Q9BXK1 252 aaPredicted RBP23.53■■□□□ 1.36
MBD3-208ENST00000590830 SIX2Q9NPC8 291 aa23.53■■□□□ 1.36
MBD3-208ENST00000590830 MYH10P35580 1976 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 MYO15AQ9UKN7 3530 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 GTPBP10A4D1E9 387 aaKnown RBP23.52■■□□□ 1.36
MBD3-208ENST00000590830 TRDMT1O14717 391 aaKnown RBP23.52■■□□□ 1.36
MBD3-208ENST00000590830 MDM4O15151 490 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 GREM1O60565 184 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 SP9P0CG40 484 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 GALK1P51570 392 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 TKTL1P51854 596 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 BCAT1P54687 386 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 BST2Q10589 180 aaKnown RBP23.52■■□□□ 1.36
MBD3-208ENST00000590830 CCINQ13939 588 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 EXOC3L4Q17RC7 722 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 GAB4Q2WGN9 574 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 VWA3BQ502W6 1294 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 PM20D1Q6GTS8 502 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 FSTL4Q6MZW2 842 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 BHLHA9Q7RTU4 235 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 FAM114A1Q8IWE2 563 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 CPA6Q8N4T0 437 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 ENOX1Q8TC92 643 aaKnown RBP23.52■■□□□ 1.36
MBD3-208ENST00000590830 TUBGCP2Q9BSJ2 902 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 HESX1Q9UBX0 185 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 NAGPAQ9UK23 515 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 AJAP1Q9UKB5 411 aaPredicted RBP23.52■■□□□ 1.36
MBD3-208ENST00000590830 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.52■■□□□ 1.36
MBD3-208ENST00000590830 MIA3Q5JRA6 1907 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 CACNA1IQ9P0X4 2223 aa23.52■■□□□ 1.36
MBD3-208ENST00000590830 E2F8A0AVK6 867 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 MBD3O95983 291 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 ATP5C1P36542 298 aaKnown RBP23.51■■□□□ 1.35
MBD3-208ENST00000590830 TMEM196Q5HYL7 178 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 Q6ZS52 159 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 C11orf57Q6ZUT1 292 aaPredicted RBP23.51■■□□□ 1.35
MBD3-208ENST00000590830 DDX42Q86XP3 938 aaKnown RBP eCLIP23.51■■□□□ 1.35
MBD3-208ENST00000590830 SLC35F5Q8WV83 523 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 ULBP1Q9BZM6 244 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 NDST4Q9H3R1 872 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 ACP6Q9NPH0 428 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 NFE2L3Q9Y4A8 694 aa23.51■■□□□ 1.35
MBD3-208ENST00000590830 BECN2A8MW95 431 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 KCNJ18B7U540 433 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 PLA2G4AP47712 749 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 SLC8A3P57103 927 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 KCNJ12Q14500 433 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 TCP11X2Q5H9J9 407 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 CCDC183Q5T5S1 534 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 KLHDC10Q6PID8 442 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 RHBDF2Q6PJF5 856 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 MAMSTRQ6ZN01 415 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 ZNF276Q8N554 614 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 KCTD13Q8WZ19 329 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 SECISBP2LQ93073 1101 aaKnown RBP23.5■■□□□ 1.35
MBD3-208ENST00000590830 NACA2Q9H009 215 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 CLIC5Q9NZA1 410 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 TMEM63CQ9P1W3 806 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 APEX2Q9UBZ4 518 aa23.5■■□□□ 1.35
MBD3-208ENST00000590830 HELZP42694 1942 aaKnown RBP23.5■■□□□ 1.35
MBD3-208ENST00000590830 LAMTOR5O43504 91 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 NFATC1O95644 943 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 ZBED1O96006 694 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 CYP17A1P05093 508 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 SETSIPP0DME0 302 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 IRF1P10914 325 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 KRT5P13647 590 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 PRKCSHP14314 528 aaPredicted RBP23.49■■□□□ 1.35
MBD3-208ENST00000590830 NBL1P41271 181 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 PSEN1P49768 467 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 MFAP3P55082 362 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 KCNMA1Q12791 1236 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 DHCR24Q15392 516 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 ARHGAP44Q17R89 818 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 DGKKQ5KSL6 1271 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 C10orf120Q5SQS8 335 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms