RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SIT1Q9Y3P8 196 aa17.48■□□□□ 0.39
GCDH-213ENST00000590627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.48■□□□□ 0.39
GCDH-213ENST00000590627 ZNF292O60281 2723 aa17.48■□□□□ 0.39
GCDH-213ENST00000590627 XPO1O14980 1071 aaKnown RBP17.47■□□□□ 0.39
GCDH-213ENST00000590627 AP1G2O75843 785 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 IPO7O95373 1038 aaKnown RBP17.47■□□□□ 0.39
GCDH-213ENST00000590627 ATF2P15336 505 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 BDNFP23560 247 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 PLA2G4AP47712 749 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 STARD6P59095 220 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 KRT83P78385 493 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 PDE4CQ08493 712 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 CCDC122Q5T0U0 273 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 PARM1Q6UWI2 310 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 CLEC20AQ6ZU45 233 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 ATAD1Q8NBU5 361 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 C1orf131Q8NDD1 294 aaKnown RBP17.47■□□□□ 0.39
GCDH-213ENST00000590627 SLC7A14Q8TBB6 771 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 CPA5Q8WXQ8 436 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 FGF13Q92913 245 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 HSFY1Q96LI6 401 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 NOX5Q96PH1 765 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 SMOQ99835 787 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 PNPLA8Q9NP80 782 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 CYLDQ9NQC7 956 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 ABI2Q9NYB9 513 aaPredicted RBP17.47■□□□□ 0.39
GCDH-213ENST00000590627 DLGAP2Q9P1A6 1054 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 INTUQ9ULD6 942 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 REXO2Q9Y3B8 237 aaKnown RBP17.47■□□□□ 0.39
GCDH-213ENST00000590627 ADGRG1Q9Y653 693 aa17.47■□□□□ 0.39
GCDH-213ENST00000590627 WDR87Q6ZQQ6 2873 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 EP300Q09472 2414 aaPredicted RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 CCL16O15467 120 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 FTLP02792 175 aaPredicted RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 MMP8P22894 467 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 CYP2F1P24903 491 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 NSFP46459 744 aaKnown RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 GPC5P78333 572 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 NTHL1P78549 312 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 PDCLQ13371 301 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 TOGARAM2Q6ZUX3 1019 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 TMEM110Q86TL2 294 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 ZMIZ2Q8NF64 920 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 KCTD13Q8WZ19 329 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 TRIM44Q96DX7 344 aaPredicted RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 VCPIP1Q96JH7 1222 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 C8orf48Q96LL4 319 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 CEP295NLQ96MC4 621 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 PGLYRP2Q96PD5 576 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 RPP25Q9BUL9 199 aaKnown RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 DMAP1Q9NPF5 467 aaPredicted RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 LUC7LQ9NQ29 371 aaKnown RBP17.46■□□□□ 0.39
GCDH-213ENST00000590627 TMEM30AQ9NV96 361 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 CYTH4Q9UIA0 394 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 PCDHA13Q9Y5I0 950 aa17.46■□□□□ 0.39
GCDH-213ENST00000590627 TULP2O00295 520 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 TRIM66O15016 1216 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 BEST1O76090 585 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 DCNP07585 359 aaKnown RBP17.45■□□□□ 0.38
GCDH-213ENST00000590627 MAGEA1P43355 309 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 GABRB2P47870 512 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 TUFMP49411 452 aaKnown RBP17.45■□□□□ 0.38
GCDH-213ENST00000590627 CACNA2D1P54289 1103 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 MAP3K7CLP57077 242 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 ADCY1Q08828 1119 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 PMF1Q6P1K2 205 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 MON1BQ7L1V2 547 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 ERICH1Q86X53 443 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 TCEAL8Q8IYN2 117 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 PJA1Q8NG27 643 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 MIS12Q9H081 205 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
GCDH-213ENST00000590627 FANCMQ8IYD8 2048 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 NOTCH4Q99466 2003 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 ANKRD62A6NC57 917 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 TMCO5BA8MYB1 307 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 HHLA1C9JL84 531 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 LMNAP02545 664 aaKnown RBP17.44■□□□□ 0.38
GCDH-213ENST00000590627 H2AFZP0C0S5 128 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 ACADSBP45954 432 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 SNX16P57768 344 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 PFKPQ01813 784 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 PRKCQQ04759 706 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 PTP4A2Q12974 167 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 DUSP4Q13115 394 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 PTPN20Q4JDL3 420 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 PABPC1LQ4VXU2 614 aaKnown RBP17.44■□□□□ 0.38
GCDH-213ENST00000590627 RAB41Q5JT25 222 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 ZC3H14Q6PJT7 736 aaKnown RBP17.44■□□□□ 0.38
GCDH-213ENST00000590627 H2AFVQ71UI9 128 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 C1orf210Q8IVY1 113 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 MCOLN2Q8IZK6 566 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 MSANTD4Q8NCY6 345 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 ACRBPQ8NEB7 543 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 ITFG1Q8TB96 612 aa17.44■□□□□ 0.38
GCDH-213ENST00000590627 TRIM11Q96F44 468 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms