RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 LMO3Q8TAP4 145 aa19■□□□□ 0.63
CIRBP-227ENST00000590188 UBA3Q8TBC4 463 aa19■□□□□ 0.63
CIRBP-227ENST00000590188 P2RY13Q9BPV8 354 aa19■□□□□ 0.63
CIRBP-227ENST00000590188 INTS2Q9H0H0 1204 aaKnown RBP19■□□□□ 0.63
CIRBP-227ENST00000590188 PNPLA8Q9NP80 782 aa19■□□□□ 0.63
CIRBP-227ENST00000590188 NAGPAQ9UK23 515 aa19■□□□□ 0.63
CIRBP-227ENST00000590188 TRDMT1O14717 391 aaKnown RBP18.99■□□□□ 0.63
CIRBP-227ENST00000590188 P4HA2O15460 535 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 CYP17A1P05093 508 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 RARGP13631 454 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 CXCL12P48061 93 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 TUBP50607 506 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 CCR3P51677 355 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 MARSP56192 900 aaKnown RBP18.99■□□□□ 0.63
CIRBP-227ENST00000590188 DPCR1Q3MIW9 517 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 ZC3H14Q6PJT7 736 aaKnown RBP18.99■□□□□ 0.63
CIRBP-227ENST00000590188 DDX42Q86XP3 938 aaKnown RBP eCLIP18.99■□□□□ 0.63
CIRBP-227ENST00000590188 MLKLQ8NB16 471 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 ANKRD52Q8NB46 1076 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 CD101Q93033 1021 aa18.99■□□□□ 0.63
CIRBP-227ENST00000590188 POLR3BQ9NW08 1133 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-227ENST00000590188 RNF225M0QZC1 329 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-227ENST00000590188 PMM2O15305 246 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 RNF40O75150 1001 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 PDE4CQ08493 712 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 DHCR24Q15392 516 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 ZNF528Q3MIS6 628 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 HSP90AA4PQ58FG1 418 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 SCD5Q86SK9 330 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 SPEM1Q8N4L4 309 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 NDRG1Q92597 394 aaKnown RBP18.98■□□□□ 0.63
CIRBP-227ENST00000590188 CRACR2AQ9BSW2 395 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 IER2Q9BTL4 223 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 FAM124BQ9H5Z6 455 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-227ENST00000590188 HESX1Q9UBX0 185 aa18.98■□□□□ 0.63
CIRBP-227ENST00000590188 SLC9A3R1O14745 358 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 VDRP11473 427 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 BRD2P25440 801 aaKnown RBP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 ATP5C1P36542 298 aaKnown RBP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 MTIF2P46199 727 aaKnown RBP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 BCAT1P54687 386 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 SLC8A3P57103 927 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 DMWDQ09019 674 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 C10orf120Q5SQS8 335 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 HEATR6Q6AI08 1181 aaKnown RBP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 CCDC186Q7Z3E2 898 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 BBS7Q8IWZ6 715 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 ADGRG2Q8IZP9 1017 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 RBBP8NLQ8NC74 664 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 TFAP2BQ92481 460 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 GBP4Q96PP9 640 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.97■□□□□ 0.63
CIRBP-227ENST00000590188 ZSCAN32Q9NX65 697 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 USP3Q9Y6I4 520 aa18.97■□□□□ 0.63
CIRBP-227ENST00000590188 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 ANTXRLA6NF34 631 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 O00370 1275 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 TDGF1P13385 188 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 OPRD1P41143 372 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 SLC6A11P48066 632 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 TKTL1P51854 596 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 SEC13P55735 322 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 APBA1Q02410 837 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 BST2Q10589 180 aaKnown RBP18.96■□□□□ 0.63
CIRBP-227ENST00000590188 PPP2R5DQ14738 602 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 GAB4Q2WGN9 574 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 GJB7Q6PEY0 223 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 RHBDF2Q6PJF5 856 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 MIB1Q86YT6 1006 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 IRF2BP1Q8IU81 584 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 GPT2Q8TD30 523 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 EZH1Q92800 747 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-227ENST00000590188 KREMEN1Q96MU8 473 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 KLF16Q9BXK1 252 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-227ENST00000590188 ULBP1Q9BZM6 244 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 CYLDQ9NQC7 956 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 RASAL2Q9UJF2 1139 aa18.96■□□□□ 0.63
CIRBP-227ENST00000590188 CHURC1-FNTBB4DL54 471 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 M0QYV0 167 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 PIK3R2O00459 728 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 XPO1O14980 1071 aaKnown RBP18.95■□□□□ 0.62
CIRBP-227ENST00000590188 LMNAP02545 664 aaKnown RBP18.95■□□□□ 0.62
CIRBP-227ENST00000590188 HMBSP08397 361 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 RALAP11233 206 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 ADH5P11766 374 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 KRT5P13647 590 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 DRD1P21728 446 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 FNTBP49356 437 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 RGS7P49802 495 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 RAB41Q5JT25 222 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 LY6G5CQ5SRR4 150 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 C12orf40Q86WS4 652 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 SYNPOQ8N3V7 929 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 RPLP0P6Q8NHW5 317 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 EXOC4Q96A65 974 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
CIRBP-227ENST00000590188 ZSWIM1Q9BR11 485 aa18.95■□□□□ 0.62
CIRBP-227ENST00000590188 LRRC4Q9HBW1 653 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms