RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
RFX1-207ENST00000589937 CDV3Q9UKY7 258 aaKnown RBP13.4□□□□□ -0.26
RFX1-207ENST00000589937 ATP6V1DQ9Y5K8 247 aa13.4□□□□□ -0.26
RFX1-207ENST00000589937 CNOT1A5YKK6 2376 aaKnown RBP13.39□□□□□ -0.27
RFX1-207ENST00000589937 ADAMTS9Q9P2N4 1935 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.39□□□□□ -0.27
RFX1-207ENST00000589937 A0A1W2PQH9 124 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 DCDC2BA2VCK2 349 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 GREM1O60565 184 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 TLR5O60602 858 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 PSMC2P35998 433 aaKnown RBP13.39□□□□□ -0.27
RFX1-207ENST00000589937 MXI1P50539 228 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ATXN1P54253 815 aaKnown RBP13.39□□□□□ -0.27
RFX1-207ENST00000589937 AMPD2Q01433 879 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 LMNB2Q03252 620 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 NR1H3Q13133 447 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 PUM1Q14671 1186 aaKnown RBP eCLIP13.39□□□□□ -0.27
RFX1-207ENST00000589937 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
RFX1-207ENST00000589937 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 PPP1R26Q5T8A7 1209 aaPredicted RBP13.39□□□□□ -0.27
RFX1-207ENST00000589937 EMC10Q5UCC4 262 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 TCEAL6Q6IPX3 200 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 UNC93AQ86WB7 457 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ADGRG2Q8IZP9 1017 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 PHTF2Q8N3S3 785 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ALLCQ8N6M5 410 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 NAT16Q8N8M0 369 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 OVCA2Q8WZ82 227 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 TCEAL3Q969E4 200 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ERLEC1Q96DZ1 483 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 P2RY11Q96G91 374 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 IMPG2Q9BZV3 1241 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ARRDC1-AS1Q9H2J1 176 aa13.39□□□□□ -0.27
RFX1-207ENST00000589937 ATG13O75143 517 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 KIF20AO95235 890 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 APBB3O95704 486 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 ACO1P21399 889 aaKnown RBP13.38□□□□□ -0.27
RFX1-207ENST00000589937 CNR2P34972 360 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 TIE1P35590 1138 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 EDRF1Q3B7T1 1238 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 FBXO43Q4G163 708 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 SNX30Q5VWJ9 437 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 ANO7Q6IWH7 933 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 TTC30AQ86WT1 665 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 TMEM25Q86YD3 366 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 TATDN2Q93075 761 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 ACDQ96AP0 544 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 CYFIP2Q96F07 1278 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 HNRNPABQ99729 332 aaKnown RBP13.38□□□□□ -0.27
RFX1-207ENST00000589937 NT5C1AQ9BXI3 368 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 NACA2Q9H009 215 aa13.38□□□□□ -0.27
RFX1-207ENST00000589937 PI4KAP42356 2102 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 E2F8A0AVK6 867 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 SGK1O00141 431 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 EPN2O95208 641 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 KAT7O95251 611 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 KLF8O95600 359 aaPredicted RBP13.37□□□□□ -0.27
RFX1-207ENST00000589937 ADH1CP00326 375 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
RFX1-207ENST00000589937 BCKDHBP21953 392 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 RPL13P26373 211 aaKnown RBP13.37□□□□□ -0.27
RFX1-207ENST00000589937 TUBP50607 506 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 DGKEP52429 567 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 CSRP2Q16527 193 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 PLK5Q496M5 336 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 KRT39Q6A163 491 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 ANKRD40Q6AI12 368 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 SCD5Q86SK9 330 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
RFX1-207ENST00000589937 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 ZC3H3Q8IXZ2 948 aaKnown RBP13.37□□□□□ -0.27
RFX1-207ENST00000589937 IL17RCQ8NAC3 791 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 MDGA1Q8NFP4 955 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 BHMTQ93088 406 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
RFX1-207ENST00000589937 DUSP15Q9H1R2 295 aaPredicted RBP13.37□□□□□ -0.27
RFX1-207ENST00000589937 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 ARHGEF4Q9NR80 690 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 CISHQ9NSE2 258 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 HCN2Q9UL51 889 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 MMP17Q9ULZ9 603 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 SCML2Q9UQR0 700 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 SH3BP1Q9Y3L3 701 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 PCDHA5Q9Y5H7 936 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 GON4LQ3T8J9 2241 aa13.37□□□□□ -0.27
RFX1-207ENST00000589937 MUC22E2RYF6 1773 aaPredicted RBP13.36□□□□□ -0.27
RFX1-207ENST00000589937 TULP2O00295 520 aa13.36□□□□□ -0.27
RFX1-207ENST00000589937 SLC9A3R1O14745 358 aaPredicted RBP13.36□□□□□ -0.27
RFX1-207ENST00000589937 ADAM23O75077 832 aa13.36□□□□□ -0.27
RFX1-207ENST00000589937 CALCAP01258 141 aa13.36□□□□□ -0.27
RFX1-207ENST00000589937 EPB41P11171 864 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms