RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	ULBP1	Q9BZM6	244 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	TRIM31	Q9BZY9	425 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	VIPAS39	Q9H9C1	493 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	POPDC2	Q9HBU9	364 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	TMEM30A	Q9NV96	361 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	TMLHE	Q9NVH6	421 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	FAN1	Q9Y2M0	1017 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	HHLA1	C9JL84	531 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	MDM4	O15151	490 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	ALDH2	P05091	517 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	NOS2	P35228	1153 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	SLC11A1	P49279	550 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	NDUFV1	P49821	464 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	SULT1E1	P49888	294 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	DRG2	P55039	364 aa	Known RBP	13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	CDH6	P55285	790 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	BCAR1	P56945	870 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	DAOA	P59103	153 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	LMNB2	Q03252	620 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	KRT17	Q04695	432 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	ELAVL2	Q12926	359 aa	Known RBP	13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	KRT81	Q14533	505 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	PDK2	Q15119	407 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	TRADD	Q15628	312 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	SLC25A52	Q3SY17	297 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	RAB6C	Q53S08	254 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	DCAF6	Q58WW2	860 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	ZNF280D	Q6N043	979 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	BBS12	Q6ZW61	710 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	GPRIN1	Q7Z2K8	1008 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	LRRTM3	Q86VH5	581 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	DEFB106A	Q8N104	65 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	DNAJC5G	Q8N7S2	189 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	TTC13	Q8NBP0	860 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	ATL2	Q8NHH9	583 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	GDAP1L1	Q96MZ0	367 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	SLC2A13	Q96QE2	648 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	ZCWPW1	Q9H0M4	648 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	RAB6C	Q9H0N0	254 aa		13.37	□□□□□ -0.27
RAB8A-205	ENST00000589697	LIAS	O43766	372 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	ZBED1	O96006	694 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	ECHS1	P30084	290 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	ADCY2	Q08462	1091 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	GPS2	Q13227	327 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	NFE2	Q16621	373 aa	Predicted RBP	13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	GLIPR1L2	Q4G1C9	344 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	SLC39A12	Q504Y0	691 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	VARS2	Q5ST30	1063 aa	Known RBP	13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	VSIG1	Q86XK7	387 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	RFX6	Q8HWS3	928 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	NDRG1	Q92597	394 aa	Known RBP	13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	PAWR	Q96IZ0	340 aa	Known RBP	13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	SNRNP25	Q9BV90	132 aa	Known RBP	13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	FAM129A	Q9BZQ8	928 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	MARCH5	Q9NX47	278 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	OGFR	Q9NZT2	677 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	NLRC5	Q86WI3	1866 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	PATJ	Q8NI35	1801 aa		13.36	□□□□□ -0.27
RAB8A-205	ENST00000589697	PTPRD	P23468	1912 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	CAPN9	O14815	690 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	CST8	O60676	142 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	LTF	P02788	710 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	CD48	P09326	243 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	USP17L7	P0C7H9	530 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	CAPN2	P17655	700 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	TFE3	P19532	575 aa	Predicted RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	PTK6	Q13882	451 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	BYSL	Q13895	437 aa	Known RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	TFDP2	Q14188	446 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	DPYSL3	Q14195	570 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	LRRC26	Q2I0M4	334 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	CTXN3	Q4LDR2	81 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	ERMARD	Q5T6L9	678 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	FAM171A1	Q5VUB5	890 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	FUT10	Q6P4F1	479 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	KRT222	Q8N1A0	295 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	SCML4	Q8N228	414 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	IRGQ	Q8WZA9	623 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	TRIM62	Q9BVG3	475 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	MAK16	Q9BXY0	300 aa	Known RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	ASIC3	Q9UHC3	531 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	HPCAL4	Q9UM19	191 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	OR6C75	A6NL08	312 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	ZNF487	B1APH4	448 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	ENDOD1	O94919	500 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	GALT	P07902	379 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	FAM153B	P0C7A2	387 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	FGFR3	P22607	806 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	RDX	P35241	583 aa	Known RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	RPL21	P46778	160 aa	Known RBP	13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	ARSE	P51690	589 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	LBX1	P52954	281 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	RABGGTB	P53611	331 aa		13.35	□□□□□ -0.27
RAB8A-205	ENST00000589697	DYNLT1	P63172	113 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms