RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 REEP2Q9BRK0 252 aa8.94□□□□□ -0.98
DNMT1-219ENST00000589349 CHST7Q9NS84 486 aa8.94□□□□□ -0.98
DNMT1-219ENST00000589349 KCND2Q9NZV8 630 aa8.94□□□□□ -0.98
DNMT1-219ENST00000589349 TBC1D7Q9P0N9 293 aa8.94□□□□□ -0.98
DNMT1-219ENST00000589349 SSU72P8A0A1W2PR75 194 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PODXLO00592 558 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PRRG1O14668 218 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 TOM1L1O75674 476 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PAPLNO95428 1278 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 RAC2P15153 192 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 OR1D2P34982 312 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 DDIT3P35638 169 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 BRCC3P46736 316 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PCBP3P57721 371 aaKnown RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 RESTQ13127 1097 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 MAPK7Q13164 816 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PTPN21Q16825 1174 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 RTP2Q5QGT7 225 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PPM1LQ5SGD2 360 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 HYIQ5T013 277 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 TDRD10Q5VZ19 366 aaKnown RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PDXDC1Q6P996 788 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 DSTYKQ6XUX3 929 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 GET4Q7L5D6 327 aaPredicted RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 GPR149Q86SP6 731 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 SYCP3Q8IZU3 236 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 PDILTQ8N807 584 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 TMEM161BQ8NDZ6 487 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 ST13P5Q8NFI4 369 aaPredicted RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 C18orf25Q96B23 403 aaPredicted RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 TCTN2Q96GX1 697 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 INTS4Q96HW7 963 aaKnown RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 SNX27Q96L92 541 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 UROC1Q96N76 676 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 MSTO1Q9BUK6 570 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 ZSCAN16Q9H4T2 348 aaPredicted RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 MRPL44Q9H9J2 332 aaKnown RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 RPF1Q9H9Y2 349 aaKnown RBP8.93□□□□□ -0.98
DNMT1-219ENST00000589349 ARHGAP28Q9P2N2 729 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 ODF2LQ9ULJ1 636 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 TBX20Q9UMR3 447 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 REV3LO60673 3130 aa8.93□□□□□ -0.98
DNMT1-219ENST00000589349 ATG2AQ2TAZ0 1938 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 A0A1W2PQH9 124 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 CCL16O15467 120 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 SLC26A4O43511 780 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 CLSTN1O94985 981 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 CLTAP09496 248 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 CXCL8P10145 99 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 TKTP29401 623 aaKnown RBP8.92□□□□□ -0.98
DNMT1-219ENST00000589349 NMT1P30419 496 aaKnown RBP8.92□□□□□ -0.98
DNMT1-219ENST00000589349 ARID5AQ03989 594 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 PPP2R5EQ16537 467 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 ANKRD39Q53RE8 183 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 CCDC73Q6ZRK6 1079 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 USP49Q70CQ1 688 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 USP37Q86T82 979 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 ANAPC16Q96DE5 110 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 PLEKHA4Q9H4M7 779 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 RXFP1Q9HBX9 757 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 GFOD1Q9NXC2 390 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 MTMR6Q9Y217 621 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 SRPRBQ9Y5M8 271 aaKnown RBP8.92□□□□□ -0.98
DNMT1-219ENST00000589349 CDY1Q9Y6F8 540 aa8.92□□□□□ -0.98
DNMT1-219ENST00000589349 SPTBN5Q9NRC6 3674 aaKnown RBP8.92□□□□□ -0.98
DNMT1-219ENST00000589349 NCOR1O75376 2440 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 ZMYM2Q9UBW7 1377 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 H7C4K7 107 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 XPOTO43592 962 aaKnown RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 GCNT3O95395 438 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 C8AP07357 584 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 RPL9P32969 192 aaKnown RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 TEKQ02763 1124 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 SIGLEC14Q08ET2 396 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 DUSP4Q13115 394 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 KYAT1Q16773 422 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 UPP1Q16831 310 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 CTXN3Q4LDR2 81 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 ZC2HC1CQ53FD0 456 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 RALGPS1Q5JS13 557 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 ADALQ6DHV7 355 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 ZPBP2Q6X784 338 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 C15orf39Q6ZRI6 1047 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 ANKS3Q6ZW76 656 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 GRASPQ7Z6J2 395 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 SFR1Q86XK3 245 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 LNX1Q8TBB1 728 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 SLC7A14Q8TBB6 771 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 FEZF2Q8TBJ5 459 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 POMGNT1Q8WZA1 660 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 PPP1R10Q96QC0 940 aaKnown RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 USP28Q96RU2 1077 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 NTPCRQ9BSD7 190 aaKnown RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 CCSER1Q9C0I3 900 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 BLOC1S4Q9NUP1 217 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 C19orf73Q9NVV2 129 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 FNIP2Q9P278 1114 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 FBXO2Q9UK22 296 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-219ENST00000589349 EXOC7Q9UPT5 735 aa8.91□□□□□ -0.98
DNMT1-219ENST00000589349 SORCS3Q9UPU3 1222 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms