RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CDKN2BP42772 138 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 DAOAP59103 153 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 YWHAZP63104 245 aaKnown RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 SLC7A5Q01650 507 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 DR1Q01658 176 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 C15orf59Q2T9L4 293 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 ATP13A4Q4VNC1 1196 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 BOLA3Q53S33 107 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 FAM171A1Q5VUB5 890 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TXNRD3NBQ6F5E7 133 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 MFSD7Q6UXD7 560 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 CCNI2Q6ZMN8 369 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 VSIG1Q86XK7 387 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 ZDHHC14Q8IZN3 488 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 IRGQQ8WZA9 623 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 SLCO2A1Q92959 643 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TOP1MTQ969P6 601 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 SLC2A13Q96QE2 648 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TMEM209Q96SK2 561 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 KCNK16Q96T55 309 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TRIM62Q9BVG3 475 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 RAB17Q9H0T7 212 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 ZWILCHQ9H900 591 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 POPDC2Q9HBU9 364 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 NGRNQ9NPE2 291 aaKnown RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 PRDM5Q9NQX1 630 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 RASAL2Q9UJF2 1139 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 STAP1Q9ULZ2 295 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TCRBV7S2A1N4TA0A589 114 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 H7C4K7 107 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 MDM4O15151 490 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 KDELR1P24390 212 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 NOS2P35228 1153 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 COILP38432 576 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 BCAR1P56945 870 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 ATP11AP98196 1134 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 GUCY2DQ02846 1103 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 SMARCB1Q12824 385 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TAZQ16635 292 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 CDO1Q16878 200 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 SLC25A52Q3SY17 297 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 CTXN3Q4LDR2 81 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TJAP1Q5JTD0 557 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 CCDC137Q6PK04 289 aaKnown RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 CYP4V2Q6ZWL3 525 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 RAPGEF5Q92565 580 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 GPR62Q9BZJ7 368 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 ULBP1Q9BZM6 244 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TMEM30AQ9NV96 361 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 KLHL11Q9NVR0 708 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 RRN3Q9NYV6 651 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 PCSK1NQ9UHG2 260 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 UTP11Q9Y3A2 253 aaKnown RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 C3orf70A6NLC5 250 aaPredicted RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 ATP8B1O43520 1251 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 UPP2O95045 317 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 ZBED1O96006 694 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 CSF2RAP15509 400 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 ALDH7A1P49419 539 aaKnown RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 HDAC4P56524 1084 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 CUL1Q13616 776 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 PDK2Q15119 407 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 CCNG2Q16589 344 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 SMTNL2Q2TAL5 461 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 SH3PXD2AQ5TCZ1 1133 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 PM20D1Q6GTS8 502 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 ANKS3Q6ZW76 656 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 MAP7D3Q8IWC1 876 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 GRK7Q8WTQ7 553 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 NT5C3BQ969T7 300 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 ZNF689Q96CS4 500 aaPredicted RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 PEBP4Q96S96 227 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 CWH43Q9H720 699 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 RC3H2Q9HBD1 1191 aaKnown RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 HCSTQ9UBK5 93 aa12.6□□□□□ -0.39
CCBE1-203ENST00000589116 FEZ2Q9UHY8 353 aaPredicted RBP12.6□□□□□ -0.39
CCBE1-203ENST00000589116 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 TRIM66O15016 1216 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 TTI1O43156 1089 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 ZMYND10O75800 440 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 ENDOD1O94919 500 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 LTFP02788 710 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 FOSL2P15408 326 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms