RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 VSX1Q9NZR4 365 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF212Q9UDV6 495 aa4.14□□□□□ -1.75
SMAD4-207ENST00000589076 SHOC2Q9UQ13 582 aa4.14□□□□□ -1.75
SMAD4-207ENST00000589076 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 LOC102723971A0A1B0GUV8 181 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 CLCA1A8K7I4 914 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 CCP110O43303 1012 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TCEA3O75764 348 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TUBB4AP04350 444 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 HARSP12081 509 aaKnown RBP4.13□□□□□ -1.75
SMAD4-207ENST00000589076 IL1R1P14778 569 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 EEF1GP26641 437 aaKnown RBP4.13□□□□□ -1.75
SMAD4-207ENST00000589076 IL1R2P27930 398 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 GCLCP48506 637 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-207ENST00000589076 ALDH9A1P49189 494 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TNFAIP2Q03169 654 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 PMS2P11Q13670 270 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 BOP1Q14137 746 aaKnown RBP4.13□□□□□ -1.75
SMAD4-207ENST00000589076 ZRSR2Q15696 482 aaKnown RBP4.13□□□□□ -1.75
SMAD4-207ENST00000589076 GRAMD1BQ3KR37 738 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 MGAT5BQ3V5L5 792 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 RUSC1-AS1Q66K80 236 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 PGBD2Q6P3X8 592 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 KRT28Q7Z3Y7 464 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TMPRSS9Q7Z410 1059 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TECPR1Q7Z6L1 1165 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 CCDC150Q8NCX0 1101 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 PSD4Q8NDX1 1056 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 SMCR8Q8TEV9 937 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-207ENST00000589076 ATRIPQ8WXE1 791 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 RAPGEF4Q8WZA2 1011 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TBC1D5Q92609 795 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TMEM41AQ96HV5 264 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 NELL2Q99435 816 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TTYH3Q9C0H2 523 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 TBC1D23Q9NUY8 699 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 HDAC9Q9UKV0 1011 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 CAPN11Q9UMQ6 739 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 ADGRA2Q96PE1 1338 aa4.13□□□□□ -1.75
SMAD4-207ENST00000589076 DCLK1O15075 740 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 PLA2G6O60733 806 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 NTN1O95631 604 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 LATS1O95835 1130 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 A1BGP04217 495 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 MYL4P12829 197 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 ITGALP20701 1170 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 IL6STP40189 918 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-207ENST00000589076 HSPA7P48741 367 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 PXNP49023 591 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-207ENST00000589076 LOXL3P58215 753 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 RAPGEF1Q13905 1077 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 ARHGEF7Q14155 803 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 DHX8Q14562 1220 aaKnown RBP4.12□□□□□ -1.75
SMAD4-207ENST00000589076 MPEG1Q2M385 716 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 SLC35G1Q2M3R5 365 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 PLA1AQ53H76 456 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 PRAMEF17Q5VTA0 474 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 AWAT2Q6E213 333 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 SFRP4Q6FHJ7 346 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-207ENST00000589076 ZDHHC24Q6UX98 284 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 FAM9AQ8IZU1 332 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-207ENST00000589076 POF1BQ8WVV4 589 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 OSBPL9Q96SU4 736 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 CRB3Q9BUF7 120 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 TTLL2Q9BWV7 592 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 PTPRHQ9HD43 1115 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 TM7SF3Q9NS93 570 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 GJB4Q9NTQ9 266 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 SERTAD4Q9NUC0 356 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 MID2Q9UJV3 735 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 CDC23Q9UJX2 597 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 MAN2B2Q9Y2E5 1009 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 PCDHGB2Q9Y5G2 931 aa4.12□□□□□ -1.75
SMAD4-207ENST00000589076 A0A087WV62 115 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 GOLGA6L3A6NEY3 463 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 SMIM22K7EJ46 135 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 QSOX1O00391 747 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 FFAR2O15552 330 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 IDEP14735 1019 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 ACVR2AP27037 513 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 CPT1AP50416 773 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 HNRNPMP52272 730 aaKnown RBP eCLIP4.11□□□□□ -1.753e-7■□□□□ 10.2
SMAD4-207ENST00000589076 DGKEP52429 567 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 COPAP53621 1224 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 LILRA4P59901 499 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 MC2RQ01718 297 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 KRT17Q04695 432 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 STARD3Q14849 445 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 NPY5RQ15761 445 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 TBCCQ15814 346 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 PDCD2Q16342 344 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-207ENST00000589076 PROSER3Q2NL68 480 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF260Q3ZCT1 412 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 ERAP2Q6P179 960 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 KRT73Q86Y46 540 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 CNGA4Q8IV77 575 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF527Q8NB42 609 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 CYP2W1Q8TAV3 490 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 RFKQ969G6 155 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms