RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SLC26A11Q86WA9 606 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 VPS52Q8N1B4 723 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 ARHGAP24Q8N264 748 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 FAM71DQ8N9W8 422 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 SH3TC2Q8TF17 1288 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 SLC44A1Q8WWI5 657 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 APOPT1Q96IL0 206 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 RSRC1Q96IZ7 334 aaKnown RBP7.46□□□□□ -1.22
SPIDR-228ENST00000588781 TNIP3Q96KP6 325 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 HSFY1Q96LI6 401 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 NAT9Q9BTE0 207 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 SLC4A5Q9BY07 1137 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 TRIM55Q9BYV6 548 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 SDCBP2Q9H190 292 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 SNX25Q9H3E2 840 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 FAM96AQ9H5X1 160 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 NOD2Q9HC29 1040 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 ARHGEF3Q9NR81 526 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPIDR-228ENST00000588781 MKS1Q9NXB0 559 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 NOP53Q9NZM5 478 aaKnown RBP7.46□□□□□ -1.22
SPIDR-228ENST00000588781 TSPAN16Q9UKR8 245 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 UBQLN1Q9UMX0 589 aaKnown RBP7.46□□□□□ -1.22
SPIDR-228ENST00000588781 FZD1Q9UP38 647 aa7.46□□□□□ -1.22
SPIDR-228ENST00000588781 MTO1Q9Y2Z2 717 aaKnown RBP7.46□□□□□ -1.22
SPIDR-228ENST00000588781 E7ENQ6 273 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 H3BRB1 525 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 C2CD2LO14523 706 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 KLF11O14901 512 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TSPAN1O60635 241 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 LPXNO60711 386 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 MLNP12872 115 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TCF4P15884 667 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CREB1P16220 341 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 KRT4P19013 534 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 GCAP28676 217 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 FOXN2P32314 431 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 MAP2K2P36507 400 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 ARL4AP40617 200 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 GTF2A2P52657 109 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 ZNF135P52742 658 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 GPX6P59796 221 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 PPARDQ03181 441 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SLC18A2Q05940 514 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 PDE4CQ08493 712 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 PTK7Q13308 1070 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 MPP2Q14168 576 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 KCNJ11Q14654 390 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 GRIK4Q16099 956 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SV2CQ496J9 727 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 KCNT1Q5JUK3 1230 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 EFHC1Q5JVL4 640 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 WLSQ5T9L3 541 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SLC9A4Q6AI14 798 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TXNRD3NBQ6F5E7 133 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SCYL2Q6P3W7 929 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CYS1Q717R9 158 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 STRADAQ7RTN6 431 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CATSPER4Q7RTX7 472 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TMEM110Q86TL2 294 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 LRRC6Q86X45 466 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 UNC45BQ8IWX7 931 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 C4orf33Q8N1A6 199 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 EMC1Q8N766 993 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CEP120Q8N960 986 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 GLIS1Q8NBF1 620 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 OR6J1Q8NGC5 347 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 FAM172AQ8WUF8 416 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TRAPPC12Q8WVT3 735 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 ZNF75CPQ92670 426 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CDKL2Q92772 493 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SNX27Q96L92 541 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 PWWP2AQ96N64 755 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SIKE1Q9BRV8 207 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TRIM6Q9C030 488 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 LRMDAQ9H2I8 198 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 RNPEPQ9H4A4 650 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TUT1Q9H6E5 874 aaKnown RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 MINDY3Q9H8M7 445 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 PCDH18Q9HCL0 1135 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 MLXIPLQ9NP71 852 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 NGRNQ9NPE2 291 aaKnown RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 RAB6BQ9NRW1 208 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-228ENST00000588781 MORF4L1Q9UBU8 362 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 CYTH4Q9UIA0 394 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 ZFP69BQ9UJL9 534 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 RAD54BQ9Y620 910 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 OTOFQ9HC10 1997 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 TRPM7Q96QT4 1865 aa7.45□□□□□ -1.22
SPIDR-228ENST00000588781 SMIM35A0A1B0GVV1 85 aa7.44□□□□□ -1.22
SPIDR-228ENST00000588781 E5RJQ4 531 aa7.44□□□□□ -1.22
SPIDR-228ENST00000588781 H3BRJ5 948 aa7.44□□□□□ -1.22
SPIDR-228ENST00000588781 GOLGA8MH3BSY2 632 aa7.44□□□□□ -1.22
SPIDR-228ENST00000588781 AP3B1O00203 1094 aa7.44□□□□□ -1.22
SPIDR-228ENST00000588781 COPEO14579 308 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms