RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CLDN10P78369 228 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 FOXC1Q12948 553 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 STK38Q15208 465 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 TRIM61Q5EBN2 209 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 UNC13DQ70J99 1090 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 ARMCX6Q7L4S7 300 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 LPCAT2Q7L5N7 544 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 TTC30AQ86WT1 665 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 MIB1Q86YT6 1006 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 BBS7Q8IWZ6 715 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 TMEFF1Q8IYR6 380 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 FUKQ8N0W3 1084 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 KDF1Q8NAX2 398 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-204ENST00000588687 HMGB4Q8WW32 186 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 GATA6Q92908 595 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 SPACA7Q96KW9 195 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 POLMQ9NP87 494 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-204ENST00000588687 GMIPQ9P107 970 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 NXF1Q9UBU9 619 aaKnown RBP19.55■□□□□ 0.72
CCDC43-204ENST00000588687 PCNX2A6NKB5 2137 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 ADAMTS9Q9P2N4 1935 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 ATXN2Q99700 1313 aaKnown RBP19.54■□□□□ 0.72
CCDC43-204ENST00000588687 LOC400499M0QZD8 3231 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 TCRBV21S2A2A0A5A6 115 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 TULP3O75386 442 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 SPDYCQ5MJ68 293 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 SYT12Q8IV01 421 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 TERB1Q8NA31 727 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 SYAP1Q96A49 352 aaPredicted RBP19.54■□□□□ 0.72
CCDC43-204ENST00000588687 ELMO3Q96BJ8 720 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 ADAM33Q9BZ11 813 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 DMAP1Q9NPF5 467 aaPredicted RBP19.54■□□□□ 0.72
CCDC43-204ENST00000588687 PILRBQ9UKJ0 227 aa19.54■□□□□ 0.72
CCDC43-204ENST00000588687 CELSR3Q9NYQ7 3312 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 CACNA1GO43497 2377 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 LRRIQ3A6PVS8 624 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-204ENST00000588687 TRIM24O15164 1050 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 VNN1O95497 513 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 ENGP17813 658 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 GABRG2P18507 467 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 AMPD3Q01432 767 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 GAD2Q05329 585 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 LMAN2Q12907 356 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 HECTD3Q5T447 861 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 SLC23A3Q6PIS1 610 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 PIP4P1Q86T03 277 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 TMEM25Q86YD3 366 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 IQUBQ8NA54 791 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 DEFB124Q8NES8 71 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 MAGEF1Q9HAY2 307 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 SPHK2Q9NRA0 654 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 KRT82Q9NSB4 513 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 HMGXB4Q9UGU5 601 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 CHORDC1Q9UHD1 332 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-204ENST00000588687 ZMIZ1Q9ULJ6 1067 aa19.53■□□□□ 0.72
CCDC43-204ENST00000588687 A0A1W2PQF6 199 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 CUTAO60888 179 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 BEST1O76090 585 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 YEATS4O95619 227 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 ITPKAP23677 461 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 HOXD12P35452 270 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 TRPC3Q13507 836 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 ZNF699Q32M78 642 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 LYSMD4Q5XG99 296 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 SCARA5Q6ZMJ2 495 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 ZNF513Q8N8E2 541 aaPredicted RBP19.52■□□□□ 0.72
CCDC43-204ENST00000588687 NAT16Q8N8M0 369 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 KCNV2Q8TDN2 545 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 PARD3BQ8TEW8 1205 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 SMARCD1Q96GM5 515 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 SMOQ99835 787 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 SCNM1Q9BWG6 230 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 BLZF1Q9H2G9 400 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 CSNK1G1Q9HCP0 422 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 CALCOCO1Q9P1Z2 691 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 BCCIPQ9P287 314 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCDC43-204ENST00000588687 CGNQ9P2M7 1197 aaKnown RBP19.52■□□□□ 0.72
CCDC43-204ENST00000588687 ATRXP46100 2492 aa19.52■□□□□ 0.72
CCDC43-204ENST00000588687 C4BPAP04003 597 aaKnown RBP19.51■□□□□ 0.71
CCDC43-204ENST00000588687 SEMA3BQ13214 749 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 KNOP1Q1ED39 458 aaKnown RBP19.51■□□□□ 0.71
CCDC43-204ENST00000588687 UAP1L1Q3KQV9 507 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 C10orf76Q5T2E6 689 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 TMEM174Q8WUU8 243 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 CAPN10Q9HC96 672 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 SLC39A2Q9NP94 309 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 FSCN3Q9NQT6 498 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 COMMD8Q9NX08 183 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
CCDC43-204ENST00000588687 SH3BP1Q9Y3L3 701 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 STARD13Q9Y3M8 1113 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 MYH10P35580 1976 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 ANKRD11Q6UB99 2663 aaPredicted RBP19.51■□□□□ 0.71
CCDC43-204ENST00000588687 BAHCC1Q9P281 2608 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 ATP8B3O60423 1300 aa19.51■□□□□ 0.71
CCDC43-204ENST00000588687 TBC1D3BA6NDS4 549 aa19.5■□□□□ 0.71
CCDC43-204ENST00000588687 UPK3BL1B0FP48 263 aa19.5■□□□□ 0.71
CCDC43-204ENST00000588687 UPK3BL2E5RIL1 263 aa19.5■□□□□ 0.71
CCDC43-204ENST00000588687 CACNG3O60359 315 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms