RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 SIRT6Q8N6T7 355 aa4.02□□□□□ -1.77
PDCD5-206ENST00000588622 ATP11CQ8NB49 1132 aa4.02□□□□□ -1.77
PDCD5-206ENST00000588622 SEMA6DQ8NFY4 1073 aa4.02□□□□□ -1.77
PDCD5-206ENST00000588622 SMCR8Q8TEV9 937 aaPredicted RBP4.02□□□□□ -1.77
PDCD5-206ENST00000588622 INO80BQ9C086 356 aaPredicted RBP4.02□□□□□ -1.77
PDCD5-206ENST00000588622 CIPCQ9C0C6 399 aa4.02□□□□□ -1.77
PDCD5-206ENST00000588622 CHST12Q9NRB3 414 aa4.02□□□□□ -1.77
PDCD5-206ENST00000588622 HPSEQ9Y251 543 aa4.02□□□□□ -1.77
PDCD5-206ENST00000588622 COL3A1P02461 1466 aaPredicted RBP4.02□□□□□ -1.77
PDCD5-206ENST00000588622 EXOC5O00471 708 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 ADAMTS3O15072 1205 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 EXOC3O60645 756 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 ARP10275 920 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 MYCLP12524 364 aaPredicted RBP4.01□□□□□ -1.77
PDCD5-206ENST00000588622 APEHP13798 732 aaKnown RBP4.01□□□□□ -1.77
PDCD5-206ENST00000588622 PHKG2P15735 406 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 STT3AP46977 705 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 TM4SF4P48230 202 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 MTHFSP49914 203 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 COPAP53621 1224 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 HSP90AB2PQ58FF8 381 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 PRAMEF17Q5VTA0 474 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 IL31Q6EBC2 164 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 GRHL2Q6ISB3 625 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 CRTC1Q6UUV9 634 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 CCAR1Q8IX12 1150 aaKnown RBP4.01□□□□□ -1.77
PDCD5-206ENST00000588622 LINC01465Q8N7H1 131 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 TERB1Q8NA31 727 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 IQCDQ96DY2 449 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 DAZAP1Q96EP5 407 aaKnown RBP4.01□□□□□ -1.77
PDCD5-206ENST00000588622 LRRC46Q96FV0 321 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 PRR11Q96HE9 360 aaPredicted RBP4.01□□□□□ -1.77
PDCD5-206ENST00000588622 KAZALD1Q96I82 304 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 ZNF668Q96K58 619 aaPredicted RBP4.01□□□□□ -1.77
PDCD5-206ENST00000588622 SNX18Q96RF0 628 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 SH2D3AQ9BRG2 576 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 ARNT2Q9HBZ2 717 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 TRIM36Q9NQ86 728 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 MYO1AQ9UBC5 1043 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 DNAJB11Q9UBS4 358 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 AMFRQ9UKV5 643 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 SLC27A6Q9Y2P4 619 aa4.01□□□□□ -1.77
PDCD5-206ENST00000588622 CLCA1A8K7I4 914 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 H7C1Q1 480 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 M0R3H8 397 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 CES2O00748 559 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 THAP12O43422 761 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 CBFA2T3O75081 653 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 CELA2AP08217 269 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 HARSP12081 509 aaKnown RBP4□□□□□ -1.77
PDCD5-206ENST00000588622 ATF7P17544 494 aaPredicted RBP4□□□□□ -1.77
PDCD5-206ENST00000588622 SFPQP23246 707 aaKnown RBP eCLIP4□□□□□ -1.77
PDCD5-206ENST00000588622 GABRB3P28472 473 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 ATICP31939 592 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 NEK3P51956 506 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 SUMO2P61956 95 aaKnown RBP4□□□□□ -1.77
PDCD5-206ENST00000588622 SLC10A2Q12908 348 aaPredicted RBP4□□□□□ -1.77
PDCD5-206ENST00000588622 MTAPQ13126 283 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 LONRF1Q17RB8 773 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 CEP78Q5JTW2 689 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 HIBCHQ6NVY1 386 aaPredicted RBP4□□□□□ -1.77
PDCD5-206ENST00000588622 MZT2AQ6P582 158 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 CLEC9AQ6UXN8 241 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 KIAA0408Q6ZU52 694 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 PTCHD4Q6ZW05 846 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 KRT28Q7Z3Y7 464 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 SFTPA1Q8IWL2 248 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 CCDC33Q8N5R6 958 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 ZDHHC12Q96GR4 267 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 ZC3H10Q96K80 434 aaKnown RBP4□□□□□ -1.77
PDCD5-206ENST00000588622 FAM227BQ96M60 508 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 HIST1H2AAQ96QV6 131 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 COLEC11Q9BWP8 271 aa4□□□□□ -1.77
PDCD5-206ENST00000588622 ANO9A1A5B4 782 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 PRRT4C9JH25 899 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 APOL1O14791 398 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 AREL1O15033 823 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 KCNQ3O43525 872 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 CA12O43570 354 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 PRC1O43663 620 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 PRAMEF2O60811 474 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 NDST3O95803 873 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 MBPP02686 304 aaPredicted RBP3.99□□□□□ -1.77
PDCD5-206ENST00000588622 CREB1P16220 341 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 TNFSF4P23510 183 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 YY1P25490 414 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 RBL1P28749 1068 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 MPGP29372 298 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 TUBA4AP68366 448 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 SRSF4Q08170 494 aaKnown RBP3.99□□□□□ -1.77
PDCD5-206ENST00000588622 IFIT5Q13325 482 aaKnown RBP3.99□□□□□ -1.77
PDCD5-206ENST00000588622 SEC23BQ15437 767 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 SLC35G1Q2M3R5 365 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 MAP9Q49MG5 647 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 RAP1GAP2Q684P5 730 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 PNLDC1Q8NA58 520 aaKnown RBP3.99□□□□□ -1.77
PDCD5-206ENST00000588622 CCDC136Q96JN2 1154 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 RIPOR3Q96MK2 946 aa3.99□□□□□ -1.77
PDCD5-206ENST00000588622 QTRT1Q9BXR0 403 aaKnown RBP3.99□□□□□ -1.77
PDCD5-206ENST00000588622 SLC25A32Q9H2D1 315 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms