RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 OXER1Q8TDS5 423 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 DENND1AQ8TEH3 1009 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 CNBD2Q96M20 576 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 CSRNP1Q96S65 589 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 TRIM15Q9C019 465 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 DPEP3Q9H4B8 488 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 MMRN2Q9H8L6 949 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 CYP26B1Q9NR63 512 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 MRPL39Q9NYK5 338 aaKnown RBP6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 SEPT3Q9UH03 358 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 ARMCX3Q9UH62 379 aaPredicted RBP6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 NUP50Q9UKX7 468 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 SNX24Q9Y343 169 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 FRMPD4Q14CM0 1322 aa6.72□□□□□ -1.33
AP000547.3-204ENST00000588548 MYH3P11055 1940 aa6.71□□□□□ -1.33
AP000547.3-204ENST00000588548 A0A1B0GTW7 788 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TRIM49BA6NDI0 452 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 BTNL10A8MVZ5 291 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TMX2-CTNND1H3BSU7 103 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ITIH1P19827 911 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CD247P20963 164 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 GRK2P25098 689 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 GABRB3P28472 473 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 HOXC13P31276 330 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 RRM2P31350 389 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 OR3A3P47888 321 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 OLR1P78380 273 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CDK16Q00536 496 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 GALNT2Q10471 571 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TCIRG1Q13488 830 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 INAVAQ3KP66 663 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CAVIN4Q5BKX8 364 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 FAM26DQ5JW98 314 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ZNF618Q5T7W0 954 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 PLEKHA7Q6IQ23 1121 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 UNC5AQ6ZN44 842 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 GATAD2AQ86YP4 633 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SIMC1Q8NDZ2 872 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SHCBP1Q8NEM2 672 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 GLG1Q92896 1179 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 PRR11Q96HE9 360 aaPredicted RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 LRGUKQ96M69 825 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TSNARE1Q96NA8 513 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 C17orf62Q9BQA9 187 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SLC4A5Q9BY07 1137 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 BOLA2Q9H3K6 86 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 RPF2Q9H7B2 306 aaKnown RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 VPS37BQ9H9H4 285 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 NPHS2Q9NP85 383 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 PARP2Q9UGN5 583 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 INPP5FQ9Y2H2 1132 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 MARF1Q9Y4F3 1742 aaKnown RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 NCAM2O15394 837 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 KATNA1O75449 491 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 POLR2MP0CAP2 368 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 DBTP11182 482 aaKnown RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 KRT3P12035 628 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ALDH1A3P47895 512 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 RAD51Q06609 339 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 BNIP3Q12983 259 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 DHX34Q14147 1143 aaKnown RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SPARCL1Q14515 664 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 KCTD2Q14681 263 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 DNAL1Q4LDG9 190 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 MIIPQ5JXC2 388 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SNAP47Q5SQN1 464 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 RNASEH2BQ5TBB1 312 aaKnown RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CYP20A1Q6UW02 462 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CHST3Q7LGC8 479 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SETD3Q86TU7 594 aaPredicted RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TTC7BQ86TV6 843 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ZNF677Q86XU0 584 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ANKRD35Q8N283 1001 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TCAIMQ8N3R3 496 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 AFAP1L2Q8N4X5 818 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SLC25A41Q8N5S1 370 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 LRRC57Q8N9N7 239 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 RBM15BQ8NDT2 890 aaKnown RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 PJA1Q8NG27 643 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SH3KBP1Q96B97 665 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TTC25Q96NG3 672 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 SNX18Q96RF0 628 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 THTPAQ9BU02 230 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 FANCFQ9NPI8 374 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 TIGARQ9NQ88 270 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 FNIP2Q9P278 1114 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ANKFY1Q9P2R3 1169 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 ANAPC5Q9UJX4 755 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 GMEB2Q9UKD1 530 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 XDHP47989 1333 aa6.71□□□□□ -1.34
AP000547.3-204ENST00000588548 KLF18A0A0U1RQI7 1052 aa6.7□□□□□ -1.34
AP000547.3-204ENST00000588548 ESYT2A0FGR8 921 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms