RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ARHGAP18Q8N392 663 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 COLGALT1Q8NBJ5 622 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 RIN2Q8WYP3 895 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 CENPIQ92674 756 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 FAM149B1Q96BN6 582 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 TBCBQ99426 244 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 RAD9AQ99638 391 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 HERC2P3Q9BVR0 1158 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 ULBP1Q9BZM6 244 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 FBXO44Q9H4M3 255 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 POPDC2Q9HBU9 364 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 ABI2Q9NYB9 513 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 HSFX1Q9UBD0 423 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 MTRRQ9UBK8 725 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 FEZ2Q9UHY8 353 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 MAFFQ9ULX9 164 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 USP3Q9Y6I4 520 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 FNDC1Q4ZHG4 1894 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 TARSL2A2RTX5 802 aaKnown RBP10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 ENDOD1O94919 500 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 RTN3O95197 1032 aaPredicted RBP10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 LTFP02788 710 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 OR4Q2P0C623 313 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 MIPP30301 263 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 MARCKSL1P49006 195 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 GLUD2P49448 558 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 NDUFV1P49821 464 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 ARPP19P56211 112 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 DSG1Q02413 1049 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 CAMK2BQ13554 666 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 PDK2Q15119 407 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 TAF5Q15542 800 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 PSMD5Q16401 504 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 CCDC142Q17RM4 750 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 RTP2Q5QGT7 225 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 DCAF12L1Q5VU92 463 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 TPGS2Q68CL5 300 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC8B1Q6J4K2 584 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 TAS1R1Q7RTX1 841 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 CPNE8Q86YQ8 564 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 CCDC50Q8IVM0 306 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 NUP93Q8N1F7 819 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 KCTD6Q8NC69 237 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 CMASQ8NFW8 434 aaPredicted RBP10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 FAM172AQ8WUF8 416 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 TEKT4Q8WW24 435 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 RUBCNQ92622 972 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC2A13Q96QE2 648 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 OSBPL8Q9BZF1 889 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 SLITRK6Q9H5Y7 841 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 NGRNQ9NPE2 291 aaKnown RBP10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 EHD2Q9NZN4 543 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 USP18Q9UMW8 372 aa10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 MRPL42Q9Y6G3 142 aaKnown RBP10.98□□□□□ -0.65
CHMP1B-202ENST00000588284 HTTP42858 3142 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 TJP3O95049 919 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 KRT1P04264 644 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 URODP06132 367 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 USP17L7P0C7H9 530 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 HAPLN1P10915 354 aaPredicted RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 KDELR1P24390 212 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 GBP1P32455 592 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 PTPN7P35236 360 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 PBX3P40426 434 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 CACNA2D1P54289 1103 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 ATP11AP98196 1134 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 C2orf54Q08AI8 447 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 DCAF6Q58WW2 860 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 ERMARDQ5T6L9 678 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 PRPF38BQ5VTL8 546 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 SCYL2Q6P3W7 929 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 MON1AQ86VX9 555 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 TMEM173Q86WV6 379 aaPredicted RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 VSIG1Q86XK7 387 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 PSTKQ8IV42 348 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 HERC6Q8IVU3 1022 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 ARFGAP1Q8N6T3 406 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 NOA1Q8NC60 698 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 LRRN4CLQ8ND94 238 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 CLEC4CQ8WTT0 213 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 BCL7CQ8WUZ0 217 aaPredicted RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 DPF3Q92784 378 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 NT5C3BQ969T7 300 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 CFAP57Q96MR6 1250 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 NPY6RQ99463 290 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 MAK16Q9BXY0 300 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 ZWILCHQ9H900 591 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 PRDM16Q9HAZ2 1276 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 MRPL17Q9NRX2 175 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 ABCC13Q9NSE7 274 aa10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 RBM12Q9NTZ6 932 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 ARGLU1Q9NWB6 273 aaPredicted RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 AFF4Q9UHB7 1163 aaKnown RBP10.97□□□□□ -0.65
CHMP1B-202ENST00000588284 PCSK1NQ9UHG2 260 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms