RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 BMT2Q1RMZ1 405 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 UAP1L1Q3KQV9 507 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 NUDT18Q6ZVK8 323 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 PAQR9Q6ZVX9 377 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 TRMT11Q7Z4G4 463 aaKnown RBP14.91□□□□□ -0.02
DNMT1-213ENST00000587604 ETFBKMTQ8IXQ9 262 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 PGBD3Q8N328 593 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 KDF1Q8NAX2 398 aaPredicted RBP14.91□□□□□ -0.02
DNMT1-213ENST00000587604 TNIP3Q96KP6 325 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 ZDHHC4Q9NPG8 344 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 TMEM74BQ9NUR3 256 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 DEC1Q9P2X7 70 aa14.91□□□□□ -0.02
DNMT1-213ENST00000587604 ZZEF1O43149 2961 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 FAM92AA1XBS5 289 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 EXOC3O60645 756 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 CUTAO60888 179 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 TULP3O75386 442 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 HOXD12P35452 270 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 AP3M2P53677 418 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 SLC5A3P53794 718 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 CDH8P55286 799 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 KNOP1Q1ED39 458 aaKnown RBP14.9□□□□□ -0.02
DNMT1-213ENST00000587604 LYSMD4Q5XG99 296 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 SLC23A3Q6PIS1 610 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 SHC4Q6S5L8 630 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 ARMCX6Q7L4S7 300 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 FAM35AQ86V20 835 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 BBS7Q8IWZ6 715 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 ZNF513Q8N8E2 541 aaPredicted RBP14.9□□□□□ -0.02
DNMT1-213ENST00000587604 NAT16Q8N8M0 369 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 SMARCD1Q96GM5 515 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 ZNF396Q96N95 335 aaPredicted RBP14.9□□□□□ -0.02
DNMT1-213ENST00000587604 MED10Q9BTT4 135 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 SMYD3Q9H7B4 428 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 CCSER2Q9H7U1 834 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 MAGEF1Q9HAY2 307 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 DMAP1Q9NPF5 467 aaPredicted RBP14.9□□□□□ -0.02
DNMT1-213ENST00000587604 SPHK2Q9NRA0 654 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 TFIP11Q9UBB9 837 aaKnown RBP14.9□□□□□ -0.02
DNMT1-213ENST00000587604 PILRBQ9UKJ0 227 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 STARD13Q9Y3M8 1113 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 ZFYVE26Q68DK2 2539 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 ADAMTS9Q9P2N4 1935 aa14.9□□□□□ -0.02
DNMT1-213ENST00000587604 PVALEFA0A1B0GWK0 134 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 YEATS4O95619 227 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ENGP17813 658 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 CASP4P49662 377 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 CLDN10P78369 228 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 BIRC3Q13489 604 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ANO4Q32M45 955 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ZNF699Q32M78 642 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ZNF667Q5HYK9 610 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
DNMT1-213ENST00000587604 TMEM25Q86YD3 366 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 FUKQ8N0W3 1084 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 TERB1Q8NA31 727 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 DEFB124Q8NES8 71 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 CEP76Q8TAP6 659 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 PARD3BQ8TEW8 1205 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 TMEM121BQ9BXQ6 578 aaPredicted RBP14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ADAM33Q9BZ11 813 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 NACA2Q9H009 215 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 SLC32A1Q9H598 525 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 GMIPQ9P107 970 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ZMIZ1Q9ULJ6 1067 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 AKAP13Q12802 2813 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 ATRXP46100 2492 aa14.89□□□□□ -0.03
DNMT1-213ENST00000587604 POLR2DO15514 142 aaKnown RBP14.88□□□□□ -0.03
DNMT1-213ENST00000587604 AP5Z1O43299 807 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 AP1G2O75843 785 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 TOP3BO95985 862 aaKnown RBP14.88□□□□□ -0.03
DNMT1-213ENST00000587604 C4BPAP04003 597 aaKnown RBP14.88□□□□□ -0.03
DNMT1-213ENST00000587604 GABRG2P18507 467 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 SPINK2P20155 84 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 ITPKAP23677 461 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 MAPK8P45983 427 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 NCOA4Q13772 614 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 DUOXA1Q1HG43 343 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 C10orf76Q5T2E6 689 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 SLC36A4Q6YBV0 504 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 HTR3DQ70Z44 454 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 GOLGA5Q8TBA6 731 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 PLEKHO2Q8TD55 490 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 SCNM1Q9BWG6 230 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 BLZF1Q9H2G9 400 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 FBXO44Q9H4M3 255 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 HCN2Q9UL51 889 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 SLC6A14Q9UN76 642 aa14.88□□□□□ -0.03
DNMT1-213ENST00000587604 PKD1L2Q7Z442 2459 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 TMEM8BA6NDV4 472 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 UPK3BL1B0FP48 263 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 UPK3BL2E5RIL1 263 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 TLR5O60602 858 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 CASP1P29466 404 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 NTSR1P30989 418 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 RPL6Q02878 288 aaKnown RBP14.87□□□□□ -0.03
DNMT1-213ENST00000587604 SEMA3BQ13214 749 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 SGSM1Q2NKQ1 1148 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms