RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 EPS8L1Q8TE68 723 aa18.18■□□□□ 0.5
DNMT1-212ENST00000587197 DEPDC1BQ8WUY9 529 aa18.18■□□□□ 0.5
DNMT1-212ENST00000587197 DDX1Q92499 740 aaKnown RBP18.18■□□□□ 0.5
DNMT1-212ENST00000587197 DNASE1L2Q92874 299 aa18.18■□□□□ 0.5
DNMT1-212ENST00000587197 IRF7Q92985 503 aa18.18■□□□□ 0.5
DNMT1-212ENST00000587197 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
DNMT1-212ENST00000587197 TRMT61BQ9BVS5 477 aaKnown RBP18.18■□□□□ 0.5
DNMT1-212ENST00000587197 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
DNMT1-212ENST00000587197 TRPV4Q9HBA0 871 aa18.18■□□□□ 0.5
DNMT1-212ENST00000587197 H0Y858 1186 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 TULP2O00295 520 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 FERP16591 822 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 PSMC3P17980 439 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 CDH5P33151 784 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-212ENST00000587197 MRE11P49959 708 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 GPR158Q5T848 1215 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 PMF1Q6P1K2 205 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 DENND1BQ6P3S1 775 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 DTWD2Q8NBA8 298 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 NELL2Q99435 816 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 PLA2G2FQ9BZM2 168 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 NUCKS1Q9H1E3 243 aaKnown RBP18.17■□□□□ 0.5
DNMT1-212ENST00000587197 LRRC4Q9HBW1 653 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 CNGB3Q9NQW8 809 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 NOCTQ9UK39 431 aaKnown RBP18.17■□□□□ 0.5
DNMT1-212ENST00000587197 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.17■□□□□ 0.5
DNMT1-212ENST00000587197 TRIOO75962 3097 aa18.17■□□□□ 0.5
DNMT1-212ENST00000587197 KANSL1LA0AUZ9 987 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 DPYSL4O14531 572 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 FCARP24071 287 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 ACADSBP45954 432 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 PSEN1P49768 467 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 TUBP50607 506 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 TKTL1P51854 596 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 CYP4F8P98187 520 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 NOP9Q86U38 636 aaKnown RBP18.16■□□□□ 0.5
DNMT1-212ENST00000587197 YAF2Q8IY57 180 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 ZNF276Q8N554 614 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 ZSWIM3Q96MP5 696 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 SLC4A5Q9BY07 1137 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 TLR8Q9NR97 1041 aaKnown RBP18.16■□□□□ 0.5
DNMT1-212ENST00000587197 AIPL1Q9NZN9 384 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 MRPS17Q9Y2R5 130 aaKnown RBP18.16■□□□□ 0.5
DNMT1-212ENST00000587197 CEP83Q9Y592 693 aa18.16■□□□□ 0.5
DNMT1-212ENST00000587197 GREB1Q4ZG55 1949 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 NCAM2O15394 837 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 FBXO21O94952 628 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 LSM8O95777 96 aaKnown RBP18.15■□□□□ 0.5
DNMT1-212ENST00000587197 ZBED1O96006 694 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 CDR2Q01850 454 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 IFRD2Q12894 506 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TRIM14Q14142 442 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 STXBP5Q5T5C0 1151 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 SPECC1LQ69YQ0 1117 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TXNDC8Q6A555 127 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TRIM72Q6ZMU5 477 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TMEM110Q86TL2 294 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 VSTM4Q8IW00 320 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 MFSD6LQ8IWD5 586 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 CMTM8Q8IZV2 173 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 ARHGAP18Q8N392 663 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 WDTC1Q8N5D0 677 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TMEM35BQ8NCS4 154 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 ZNF397Q8NF99 534 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-212ENST00000587197 PJA1Q8NG27 643 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 SYN2Q92777 582 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-212ENST00000587197 NOX5Q96PH1 765 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 OSBPL6Q9BZF3 934 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TRPV5Q9NQA5 729 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 OBP2AQ9NY56 170 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 GMIPQ9P107 970 aa18.15■□□□□ 0.5
DNMT1-212ENST00000587197 CHORDC1Q9UHD1 332 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-212ENST00000587197 TRAV19A0A0A6YYK7 116 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 LRRC53A6NM62 1247 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 ZNF263O14978 683 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 GABBR2O75899 941 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 OLFM2O95897 454 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 OAS1P00973 400 aaKnown RBP18.14■□□□□ 0.49
DNMT1-212ENST00000587197 GDI1P31150 447 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 VIPR2P41587 438 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 PRKCIP41743 596 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 MAGEA9P43362 315 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 ZBED6P86452 979 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 ADIGQ0VDE8 80 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 PDCLQ13371 301 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 GRM2Q14416 872 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 ZNF268Q14587 947 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-212ENST00000587197 UBXN2BQ14CS0 331 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 VITQ6UXI7 678 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 ARID3BQ8IVW6 561 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-212ENST00000587197 SIX6OS1Q8N1H7 587 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 MAB21L3Q8N8X9 362 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 IRGQQ8WZA9 623 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 DDX23Q9BUQ8 820 aaKnown RBP18.14■□□□□ 0.49
DNMT1-212ENST00000587197 ULBP1Q9BZM6 244 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 TRIM5Q9C035 493 aa18.14■□□□□ 0.49
DNMT1-212ENST00000587197 CLIC5Q9NZA1 410 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms