RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 C1orf220Q5T0J3 134 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 HECTD3Q5T447 861 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 SNX30Q5VWJ9 437 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 PMS2CLQ68D20 193 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 SPOPLQ6IQ16 392 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 PHTF2Q8N3S3 785 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 IL17RCQ8NAC3 791 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 TXNDC5Q8NBS9 432 aaKnown RBP14.84□□□□□ -0.03
ATG4D-206ENST00000586863 SLC2A14Q8TDB8 520 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
ATG4D-206ENST00000586863 PNKPQ96T60 521 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 SMOQ99835 787 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 ARHGEF4Q9NR80 690 aa14.84□□□□□ -0.03
ATG4D-206ENST00000586863 E2F8A0AVK6 867 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 PDXKO00764 312 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 ADAM23O75077 832 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 KLF8O95600 359 aaPredicted RBP14.83□□□□□ -0.04
ATG4D-206ENST00000586863 CAVIN2O95810 425 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 ASS1P00966 412 aaKnown RBP14.83□□□□□ -0.04
ATG4D-206ENST00000586863 APODP05090 189 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 TIE1P35590 1138 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 KIR2DL1P43626 348 aaPredicted RBP14.83□□□□□ -0.04
ATG4D-206ENST00000586863 ASPAP45381 313 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 TUBP50607 506 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 NDST1P52848 882 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 USP39Q53GS9 565 aaKnown RBP14.83□□□□□ -0.04
ATG4D-206ENST00000586863 EMC10Q5UCC4 262 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 CEP135Q66GS9 1140 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 RNF43Q68DV7 783 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 SV2AQ7L0J3 742 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 BBS7Q8IWZ6 715 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 C12orf29Q8N999 325 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 EDEM2Q9BV94 578 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.83□□□□□ -0.042e-45■■■■■ 353
ATG4D-206ENST00000586863 FAM49BQ9NUQ9 324 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 TBC1D14Q9P2M4 693 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 HPSEQ9Y251 543 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 SH3BP1Q9Y3L3 701 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 CEP192Q8TEP8 1941 aa14.83□□□□□ -0.04
ATG4D-206ENST00000586863 A0A0A0MRY4 1105 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 LNP1A1A4G5 178 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 PCNX2A6NKB5 2137 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 HLA-DRAP01903 254 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 RPN1P04843 607 aaKnown RBP14.82□□□□□ -0.04
ATG4D-206ENST00000586863 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 IRF1P10914 325 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 P4HA1P13674 534 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 CMA1P23946 247 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 GRIA2P42262 883 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 PIK3CAP42336 1068 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 MAP3K7CLP57077 242 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 SGSM1Q2NKQ1 1148 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 N4BP2L1Q5TBK1 243 aaPredicted RBP14.82□□□□□ -0.04
ATG4D-206ENST00000586863 GPRIN1Q7Z2K8 1008 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 C11orf74Q86VG3 221 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 ETFBKMTQ8IXQ9 262 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 CRYBG2Q8N1P7 616 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 NAT16Q8N8M0 369 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 OLIG1Q8TAK6 271 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 TMC2Q8TDI7 906 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 OTUB2Q96DC9 234 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 TWNKQ96RR1 684 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 LSM14BQ9BX40 385 aaKnown RBP14.82□□□□□ -0.04
ATG4D-206ENST00000586863 COMMD8Q9NX08 183 aa14.82□□□□□ -0.04
ATG4D-206ENST00000586863 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.81□□□□□ -0.04
ATG4D-206ENST00000586863 HOXC11O43248 304 aaPredicted RBP14.81□□□□□ -0.04
ATG4D-206ENST00000586863 TLR5O60602 858 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 TULP3O75386 442 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 KRT37O76014 449 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 ADORA2BP29275 332 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 GAD2Q05329 585 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 HSF5Q4G112 596 aaPredicted RBP14.81□□□□□ -0.04
ATG4D-206ENST00000586863 UNC93AQ86WB7 457 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 RLN3Q8WXF3 142 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 TAF4BQ92750 862 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 DUSP9Q99956 384 aaKnown RBP14.81□□□□□ -0.04
ATG4D-206ENST00000586863 NACA2Q9H009 215 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 APOBEC3GQ9HC16 384 aaKnown RBP14.81□□□□□ -0.04
ATG4D-206ENST00000586863 CSNK1G1Q9HCP0 422 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
ATG4D-206ENST00000586863 WDFY3Q8IZQ1 3526 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 C4orf47A7E2U8 309 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 PATE3B3GLJ2 98 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 IKBKBO14920 756 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 TRIM24O15164 1050 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 GREM1O60565 184 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 ALDH1A2O94788 518 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 TBX18O95935 607 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 MYL1P05976 194 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 FAM200BP0CF97 657 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 PMLP29590 882 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 TNFRSF4P43489 277 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 INCA1Q0VD86 236 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 EOGTQ5NDL2 527 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 CLEC20AQ6ZU45 233 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 CYP2U1Q7Z449 544 aa14.8□□□□□ -0.04
ATG4D-206ENST00000586863 TMEM25Q86YD3 366 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms